Detailed information of FUN_015799-T1 in Colpophyllia natans

Genomic Location: contig_25:254440...264163
NR annotation: CAH3037572.1, unnamed protein product [Pocillopora meandrina]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q9W757Transcription factor SOX-10 OS=Gallus gallus OX=9031 GN=SOX10 PE=2 SV=2
P57074Transcription factor SOX-8 OS=Gallus gallus OX=9031 GN=SOX8 PE=2 SV=1
Q6VVD7Transcription factor Sox-8 OS=Xenopus laevis OX=8355 GN=sox8 PE=2 SV=1
Gene familySubfamily
Transcription Factors FamilybHLH
Transcription Factors FamilyHMG

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00505HMG_boxHMG (high mobility group) boxDomainInterproscan
PF00010HLHHelix-loop-helix DNA-binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR009071DomainHigh mobility group box domainInterproscan
IPR050140FamilySRY-related HMG-box transcription factorsInterproscan
IPR011124DomainZinc finger, CW-typeInterproscan
IPR011598DomainMyc-type, basic helix-loop-helix (bHLH) domainInterproscan
IPR036910Homologous_superfamilyHigh mobility group box domain superfamilyInterproscan
IPR036638Homologous_superfamilyHelix-loop-helix DNA-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10270SOX TRANSCRIPTION FACTORInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0046983Molecular Functionprotein dimerization activityInterproscan

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