Detailed information of FUN_015876-T2 in Dendrogyra cylindrus

Genomic Location: contig_25:4190152...4234602
NR annotation: XP_020617495.1, polyubiquitin-A-like isoform X1 [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
P0CG71Polyubiquitin-A OS=Caenorhabditis elegans OX=6239 GN=ubq-1 PE=3 SV=1
P0CG50Polyubiquitin-C OS=Mus musculus OX=10090 GN=Ubc PE=1 SV=2
Q63429Polyubiquitin-C OS=Rattus norvegicus OX=10116 GN=Ubc PE=1 SV=1
Gene familySubfamily
Ubiquitin FamilyULD|UBL|NEDD8
Ubiquitin FamilyULD|UFD/UBQ|UBQ_Other
Ubiquitin FamilyULD|UFD/UBQ|UBQ_PIM

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00240ubiquitinUbiquitin familyDomainInterproscan
PF18738HEPN_DZIP3DZIP3/ hRUL138-like HEPNDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000626DomainUbiquitin-like domainInterproscan
IPR029071Homologous_superfamilyUbiquitin-like domain superfamilyInterproscan
IPR019954Conserved_siteUbiquitin conserved siteInterproscan
IPR041249DomainDZIP3-like HEPN domainInterproscan
IPR050158FamilyUbiquitin and ubiquitin-likeInterproscan
IPR019956DomainUbiquitin domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10666UBIQUITINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan
GO:0019941Biological Processmodification-dependent protein catabolic processInterproscan
GO:0031386Molecular Functionprotein tag activityInterproscan
GO:0031625Molecular Functionubiquitin protein ligase bindingInterproscan

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