Gene detail

Detailed information of FUN_016179-T1 in Siderastrea siderea

Genomic Location: contig_13:6598805...6613872
NR annotation: no NCBI-NR hit recorded
Species abbreviation SSIDE · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03909 all species →	BSD	BSD domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR035925 all species →	Homologous_superfamily	BSD domain superfamily	Interproscan
IPR051494 all species →	Family	BSD domain-containing protein	Interproscan
IPR005607 all species →	Domain	BSD domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR16019 all species →	SYNAPSE-ASSOCIATED PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0005794 all species →	Cellular Component	Golgi apparatus	Interproscan
GO:0038203 all species →	Biological Process	TORC2 signaling	Interproscan
GO:0045202 all species →	Cellular Component	synapse	Interproscan
GO:0048172 all species →	Biological Process	regulation of short-term neuronal synaptic plasticity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for FUN_016179-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.