Detailed information of FUN_016259-T1 in Acropora pulchra

Genomic Location: ptg000011l:895871...901285
NR annotation: XP_044178013.1, 5'-3' exoribonuclease 1-like isoform X4 [Acropora millepora]
Species abbreviation APULC · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P977895'-3' exoribonuclease 1 OS=Mus musculus OX=10090 GN=Xrn1 PE=1 SV=1
Q8IZH25'-3' exoribonuclease 1 OS=Homo sapiens OX=9606 GN=XRN1 PE=1 SV=1
P403835'-3' exoribonuclease 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=exo2 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001148 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03159
all species →		XRN_NXRN 5'-3' exonuclease N-terminusFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027073
all species →		Family5'-3' exoribonucleaseInterproscan
IPR004859
all species →		DomainXrn1, N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12341
all species →		5'->3' EXORIBONUCLEASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003676
all species →		Molecular Functionnucleic acid bindingInterproscan
GO:0004527
all species →		Molecular Functionexonuclease activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_016259-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP