Gene detail

Detailed information of FUN_016265-T1 in Dendrogyra cylindrus

Genomic Location: contig_26:3596424...3615098
NR annotation: XP_020615335.1, fibroblast growth factor receptor 2-like [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

FUN_016265-T1

ATGGCATTAATTTCCTCTCtTCGCCCGAATATTCAGTTGTTAGGACCAAATAAGGTCCTACGAGAAGGAGACAGTGCCAACTTGACTTGTAAAATTGTCAAAGGTTTACCTGAACCACAAGTATCCTGGATTAAAAATGACGCAGAGCTTGAAGTCAAGAACAATTTAACATTGCTGTTAACAGATGTAGCAGATGAAGATGAGGGAAGATACACCTGTCGAGCAGAAAATGATGCTGGTTTTATCACTGACAGTAAATATGTTACTGTTGAAATACCACCTAAGCTGAATCCTGAACTCAGGAATCGTTCTGTTGCGTTGAACTCCACACTTTCAATGAAATGCATTTTGAGGGGTGATCATCCACTCCAAGTGAACTGGACTAAGAATGGGGTGAATCTTGGTAATAACAATAGCAACACATTGATTGTGGATCACGTGACATTTAAGCATGCAGGACTGTATGGATGTACAGCTGTAAACCACGCTGGAAAAACTTGGACTACTTTTTGGATTGATGTAACTGTCTCTCCTCAGATTTATGTTCCTCCAAGAAACAAGTCTGTTCCTGAAGGCTACCCAGCCAACTTTACCTGCAAAGCCACAGGTATTCCAGAGCCAAAACTGTCCTGGATGTTTAATGATGGGGACCTCCCGTCAGGCATCAGTCAAACCAATCTCAGTGAAGGATCATTGCTGGAGTTGTCAAACGCAACAAAGGACATGGAGGGGACCTACAAGTGTACAGCAACAAACAAAGCTGATGCAACAACTTCCTCTGCAACTCTTCGTGTTGTTGAAAAACCCAGTGCAAAAGTTAGTCCAAATCCATACCCAACACTTACAGCAGGAGATGAACTTAGATTAACTTGCAAAGTCAATGAAGCAACAGTGAAGATTGCGTGGAAAAAAAATGGTGACCCAGTAGAAAGCCCAAGAGCACAGATTGAAACTCAAGTAGATGACAAATTAAGTAAACTTGTTATTGCGGAAGTTGTggaaggtgatagtggggaatATTCTTGTGAAGCACGTAATGGACCAGGCATTGTGGCCCACTCTACTGTGAAGATCAATGTCAAGGGTTCCACTACCACCAGGGCAGCTCTGGAGTGGTATTACATTGTTGGACCCATGTCTGGTTGCATTGTCATATTTGCCATTAGCTGTCCTGATCAAGAGCAAGAATTTGAGATGCAGTTGCTGAATGTTGAAGTGGATGAATGGGAGATTTCTGTTAAGCGTATATTACTTCAAGAGGTCATTGGCAGAGGGGCATTCGGAGCAGTCTGGTTAGCGCTTTTGAGTGAACCAGATGGAAAGCCTGGAAATCAGACAGTTGCTGCAAAATGCTTTACACCCACTGCTGGGGAAGATGGAAGAAAATCTCTGATTAGAGAAATTGAGCTGGGGAAACTTCTTGGAGTAAAGCCTCAGCCAAATATTGTCAAGTTTATTGGCTGTGTTACAACCCAAGttCATCCAATTCTGGTCATGGAGTACTTGGTGTGTGGTGACTTGCTGGGTTATCTGAGAAAAAGCCGAGGAATTCATGATAAGTATCATCTTGGACAGGGAAGTGTTCCAGAGCTGGAGATATATGACCTAGTGTTATTTGCCAAACAAATCGCTGCAGGCATGGTGTTCCTTGGATCAAGAGGGATAATCCATCGAGATCTGGCAGCTCGAAATGTGCTTCTTGATGACAACTATGTTTGCAAGGTGACCGACTTTGGACTGGCTTATCAAGATTTCAAATATGGgcacggaaatgccaaaaagGGCTGCATGCCAGTTAAATGGACTGCACCTGAGATTTTGTCAGGAAATGTTGCTGAACTTTCACCTCTTAGTGATGTGTGGTCTTATGGAATTGTGCTTTATGAGATATTCACCATTGGAGGAATTCCATATCCCGCGTGGTCCGAAGGCAAGGTGGTTGCAGAAGTCCTCAATGGATATCAAATGCCAAAGCCTGAGCACATTGATGACAAATTGTATGATATAATGACAAGATGCTGGAACCTTAACCCTGATTTCCGTCCCCCTTTTGAAAACCTGCGAAAAAGAATGGACACATATCTGCGTGAAGAGaCATATATAGAACTGATCAACATGGGACGATATGACGGCGCAAAATACTCCAAAGTTGAAGACCTCGGAGCTGAAGATGAACTGCCAAGTGAGCGAGTCAAAACAAGCGCCACTGGAAAGAAATTGGGAAAATGGTCAAGTCTCCGTTAG

Transcript

FUN_016265-T1

Protein

Uniprot

Uniprot term	Description
Q9VBW3	Tyrosine kinase receptor Cad96Ca OS=Drosophila melanogaster OX=7227 GN=Cad96Ca PE=2 SV=2
Q03364	Fibroblast growth factor receptor 2 OS=Xenopus laevis OX=8355 GN=fgfr2 PE=2 SV=1
D2IYS2	Tyrosine-protein kinase receptor torso OS=Bombyx mori OX=7091 GN=tor PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13927	Ig_3	Immunoglobulin domain	Domain	Interproscan
PF07714	PK_Tyr_Ser-Thr	Protein tyrosine and serine/threonine kinase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036179	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR008266	Active_site	Tyrosine-protein kinase, active site	Interproscan
IPR000719	Domain	Protein kinase domain	Interproscan
IPR020635	Domain	Tyrosine-protein kinase, catalytic domain	Interproscan
IPR007110	Domain	Immunoglobulin-like domain	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR001245	Domain	Serine-threonine/tyrosine-protein kinase, catalytic domain	Interproscan
IPR050958	Family	Cell Adhesion and Cytoskeletal Organization	Interproscan
IPR003599	Domain	Immunoglobulin subtype	Interproscan
IPR017441	Binding_site	Protein kinase, ATP binding site	Interproscan
IPR003598	Domain	Immunoglobulin subtype 2	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45080	CONTACTIN 5	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0004713	Molecular Function	protein tyrosine kinase activity	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0007156	Biological Process	homophilic cell adhesion via plasma membrane adhesion molecules	Interproscan