Detailed information of FUN_016369-T1 in Colpophyllia natans

Genomic Location: contig_26:3650832...3674897
NR annotation: XP_020624862.1, uncharacterized protein LOC110062338 isoform X1 [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9BYK83'-5' exoribonuclease HELZ2 OS=Homo sapiens OX=9606 GN=HELZ2 PE=1 SV=7
E9QAM53'-5' exoribonuclease HELZ2 OS=Mus musculus OX=10090 GN=Helz2 PE=1 SV=1
Q9FJR0Regulator of nonsense transcripts 1 homolog OS=Arabidopsis thaliana OX=3702 GN=UPF1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00773RNBRNB domainDomainInterproscan
PF13086AAA_11AAA domainDomainInterproscan
PF13087AAA_12AAA domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR022966Conserved_siteRibonuclease II/R, conserved siteInterproscan
IPR045055FamilyDNA2/NAM7-like helicaseInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR001900DomainRibonuclease II/RInterproscan
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR012340Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR047187DomainUpf1-like, C-terminal helicase domainInterproscan
IPR041677DomainDNA2/NAM7 helicase, helicase domainInterproscan
IPR041679DomainDNA2/NAM7 helicase-like, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10887DNA2/NAM7 HELICASE FAMILYInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0004540Molecular FunctionRNA nuclease activityInterproscan
GO:0004386Molecular Functionhelicase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K25165HELZ2; 3'-5' exoribonuclease HELZ2EC:3.1.13.1
EC:5.6.2.6
Messenger RNA biogenesisko03019deepkoala

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