Detailed information of FUN_016436-T1 in Acropora pulchra

Genomic Location: ptg000011l:3080044...3085665
NR annotation: XP_029211354.2, lupus La protein-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P05455Lupus La protein OS=Homo sapiens OX=9606 GN=SSB PE=1 SV=2
P40796La protein homolog OS=Drosophila melanogaster OX=7227 GN=La PE=1 SV=2
P10881Lupus La protein homolog OS=Bos taurus OX=9913 GN=SSB PE=2 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05383LaLa domainDomainInterproscan
PF00076RRM_1RNA recognition motifDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR045180FamilyLa domain containing proteinInterproscan
IPR006630DomainLa-type HTH domainInterproscan
IPR036390Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan
IPR000504DomainRNA recognition motif domainInterproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR002344FamilyLupus La proteinInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22792LUPUS LA PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003729Molecular FunctionmRNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0008033Biological ProcesstRNA processingInterproscan
GO:0006396Biological ProcessRNA processingInterproscan
GO:1990904Cellular Componentribonucleoprotein complexInterproscan

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