Detailed information of FUN_016640-T1 in Acropora pulchra

Genomic Location: ptg000011l:5705167...5726052
NR annotation: XP_029202115.2, F-box only protein 11-like isoform X1 [Acropora millepora]
Species abbreviation APULC · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q7TSL3F-box only protein 11 OS=Rattus norvegicus OX=10116 GN=Fbxo11 PE=2 SV=1
Q86XK2F-box only protein 11 OS=Homo sapiens OX=9606 GN=FBXO11 PE=1 SV=3
Q7TPD1F-box only protein 11 OS=Mus musculus OX=10090 GN=Fbxo11 PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003937 (this species only)
Ubiquitin familyE3|E3 activity|UBR-box · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13229
all species →
Beta_helixRight handed beta helix regionRepeatInterproscan
PF12937
all species →
F-box-likeF-box-likeDomainInterproscan
PF02207
all species →
zf-UBRPutative zinc finger in N-recognin (UBR box)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006626
all species →
RepeatParallel beta-helix repeatInterproscan
IPR036047
all species →
Homologous_superfamilyF-box-like domain superfamilyInterproscan
IPR012334
all species →
Homologous_superfamilyPectin lyase foldInterproscan
IPR003126
all species →
DomainZinc finger, UBR-typeInterproscan
IPR039448
all species →
DomainRight handed beta helix domainInterproscan
IPR001810
all species →
DomainF-box domainInterproscan
IPR011050
all species →
Homologous_superfamilyPectin lyase fold/virulence factorInterproscan
IPR006633
all species →
DomainCarbohydrate-binding/sugar hydrolysis domainInterproscan
IPR022441
all species →
RepeatParallel beta-helix repeat-2Interproscan
IPR051550
all species →
FamilySCF Complex Subunits and Alginate EpimerasesInterproscan
IPR047504
all species →
DomainF-box only protein 11, UBR-boxInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22990
all species →
F-BOX ONLY PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan
GO:0008270
all species →
Molecular Functionzinc ion bindingInterproscan
GO:0006511
all species →
Biological Processubiquitin-dependent protein catabolic processInterproscan
GO:0042981
all species →
Biological Processregulation of apoptotic processInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K10297FBXO11; F-box protein 11-Ubiquitin systemko04121deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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