Gene detail

Detailed information of FUN_016661-T1 in Acropora pulchra

Genomic Location: ptg000011l:6048745...6052833
NR annotation: XP_015750775.1, PREDICTED: methyltransferase-like protein 12, mitochondrial [Acropora digitifera]
Species Acropora pulchra · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

FUN_016661-T1

ATGCATTCTCTGAAGATAATTGGACGAAGGTATATGTCTCCAGTTTTAAAACATGGAATGAAACATTTGGGGAACCAAACCGCATTGCGTCAAATACGCTCTCTTGGAGACATGTCTGATCAATCCTTCTGGAATAGTTTTTATGCTAATCGTCCCGGGGACAAGGTCTTTGATTGGTTTGTGAATTTTGAAGATGTCTCTGTTTATCTCGAACCTCATTTTCATGCAGTAAGCTTTGATGACTTTGTGAGAATACTGGACATTGGATGTGGTACCTCAGATTTCAGCTTAAAGCTTTTTGAACACTTAAACAGGAAATGTCGTATTGATTGTGTAGACTTTTCATTTGAGGCAGTAAAAGCAATGCAAAAACTTATTAATGAGCGTGAACTGCTAGTGAACAAAACTACAGATCTCAAGGAAAGTTTTCTGTGTCGTCAGCATCTTTCAGGAATGGCTTGTCACCAAGCTGATGCCAAAAAATTACCCTTCGGAGATGCAACGTTTTCATTGGTTTTTGACAAGGGTACCTCTGATGCAGTGCTGAAGGGTGCTAATGGAGAAAGTACCTTTGCAGAGGTGGTAAAAGAATGTTTCCGTGTGCTAAAACCCGAGGGAAAGCTTATTCAGTTTTCAGATGAACCACCTGAATTACGGATCAATCTCTTGGAGAGTGTGAAGTCTCAAATAGTGCAACATTGCATGAAAGAAAATTGCAATATGACATGGGTATGGCGTGAATTAGAAGTTTGTTCAGGCTTCCAGTACTTTATGTATGTTGTCTACAAGAGAGCCCCAATTTCCATGTAACAACACATTACATTGACTAGAGCATCAACCTTTATGAAGCCCAGATTAAAAGCAAAGAGTAGTAGAAAGAAGGTGGTTCTACATATCTACAAAGAGCCCTAATGTGCAGGATAGCAAGTAATCAACCTCGTTCCCAGGGTCTCTCTACTTCCCTTCCCCTGGAACGGTCAGGGGAGGGAAGAAGAGAGACCCTGGGAACGAAATTGGCAAGTAGTGGCTCTTAATACATCTTATCAGCGGTTTCCGCACATAAAGGAGGCTAATGGGGCATTTTGTATTGTATTGTATTGTATTGTATTGACTATCAGACCCGTATATAGGCGGTTTCAAACAAAAGGACCTTTGACTGCAGGCTCAATTGCAATAACAGCCATTAGCTGCAGAGTCACTTCAGTAAGACTCACAAAGTGTCCCCTGGCACTTTGGCTCAAGTTCAACATCGCTTGTGATGAGGAATACAGGCAACAAAAGGTCAGGAAGTGTCTCCCTTACTGCGTCCATCTAGAAGACAAAAACAGGAACCAAATCCTAACCCAAGAAATAACCCAGACACAAATGCCAACCCCAGTTTTTTACTTACACCTAGCGGGAAACTTCTTCTCGTCTATCAAGACTTAGCGTACATCTTATTGCTTGCAATAAGAACATCTTATTGCTCCAATAGACTTTAGTGCGGATCCTGACAAAGTACATTTTGAAGTAGAGGACAGCTGGAACCATCAAGAGAGGAAAATCGAACTGTCTCCATTAAAGTATATAGAGCTCGCGTCATTTGCCATTCTCCCCAGTAGAAAATAACTTTCTTAAAGATTTCGTCAAAGGAATTCTTCTTATTGTAAGAAAGAGAATTGTCATAGATGCATGCATCTTCATTATAAACTTCTTTTTTTTGTACTATCCGAATGCCTTAATCAGTACCAGCGGAAATGAAGGGTGTGTTTCTCACGTGAAAAGAGCGTGGATTTCACGTTCCATGTCTCCAAGTGTGGGTCCACAATTCTTGTCAGTCGTTTTGTGCTTTCATGACAACGTACATGTAGCTGTGTTGCAATCACGTGAAAGTGGTGTGTATCACACGTGCTTCCGGTTTTGAGGAGAACAAATCGCAATGGAGGTCGACGAAGGTGTAAGGACCATTGAGTTTCGTTTTTACGGTATCGGTGATTTTTTGACTGCAAGGACATTAACCTCTAGTTCTGTCTCATACTTACGAGGCCATTTTGGATTTGTTTACTTATAAAGAAGGCTTAAACGTGGACGAGGATCTCTCGTTTTAAAGTGGTTGATGCCAGTTGGTATAAGATGTAGCGAAGGATATGTGTAAAATCGTACACTTTGTTCTTGTTACTGCCAAAAAGTGACCAACGCTGTTTCGTTTGTTAAAGAGTGTAGCGGCTTTATATGCTCGGTATGATTGTAACACTGAAGAGCAGTTTGGAATAACTTTACTTTTTCTCTGAAGTTCAACCAAGTTTAACAGAAAGAGGGCTTTGGCTGATACGCAAGCCTTGTATTAATAGCACACTCCATCCTTATTTTGTCCAGACGAAGGTTTTTGTACTATCAACAACCGACCATCTTTCCCTTCCTTTACTGACCTAAAAAAAGGAAAAACGGCAGGTACTTTTCTTGACTAGGGATAACATTCTCTCGTATTTCCTTATGCTGTTTCAGACTTTTTATTGAGCAACCGTGATTTAGTTCATTTTATAATACAAGGCATTTTTCGTTCTTTGTAAAGGATTTTTACCCCACAAGTTTCTTTTCATCGGCAAGAAACTAATTTTATCATTGAAAATTGTTCCGAATCTAAATCTGCAACATTATTCTTAGATCAACTGAAAAAAAATTTGAAGCTGTAAGTAAAGTGCATAGTCTTTGCCAATTATTAAATGTGATAAGTTGTGGGGTTGAATAATGTTGACCCATTTCCGTGAATGACCAGTTTAAGATGGCAAGGAAAGGAGATTTTACAAATGTTACGTATTCAAAAAATATTTTTGGGGTATTCCAAGAAAGAAAATGAAAT

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5RCI5	Citrate synthase-lysine N-methyltransferase CSKMT, mitochondrial OS=Pongo abelii OX=9601 GN=CSKMT PE=2 SV=1
A8MUP2	Citrate synthase-lysine N-methyltransferase CSKMT, mitochondrial OS=Homo sapiens OX=9606 GN=CSKMT PE=1 SV=1
P0DPD7	EEF1A lysine methyltransferase 4 OS=Homo sapiens OX=9606 GN=EEF1AKMT4 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0010462 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08241 all species →	Methyltransf_11	Methyltransferase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029063 all species →	Homologous_superfamily	S-adenosyl-L-methionine-dependent methyltransferase superfamily	Interproscan
IPR051419 all species →	Family	Lysine/N-terminal Methyltransferase Superfamily	Interproscan
IPR013216 all species →	Domain	Methyltransferase type 11	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12176 all species →	SAM-DEPENDENT METHYLTRANSFERASE SUPERFAMILY PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0008757 all species →	Molecular Function	S-adenosylmethionine-dependent methyltransferase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00614	CSKMT, METTL12; citrate synthase lysine N-methyltransferase	EC:2.1.1.-	Enzymes with EC numbers	-	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.