Detailed information of FUN_016743-T1 in Acropora pulchra

Genomic Location: ptg000011l:6865304...6887134
NR annotation: XP_015773916.1, PREDICTED: stonin-2-like [Acropora digitifera]
Species Acropora pulchra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8R314Solute carrier family 35 member F5 OS=Mus musculus OX=10090 GN=Slc35f5 PE=2 SV=1
Q8WV83Solute carrier family 35 member F5 OS=Homo sapiens OX=9606 GN=SLC35F5 PE=1 SV=1
Q5R6J3Solute carrier family 35 member F5 OS=Pongo abelii OX=9601 GN=SLC35F5 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007811 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00892
all species →		EamAEamA-like transporter familyFamilyInterproscan
PF00928
all species →		Adap_comp_subAdaptor complexes medium subunit familyFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000620
all species →		DomainEamA domainInterproscan
IPR036168
all species →		Homologous_superfamilyAP-2 complex subunit mu, C-terminal superfamilyInterproscan
IPR001392
all species →		FamilyClathrin adaptor, mu subunitInterproscan
IPR028565
all species →		DomainMu homology domainInterproscan
IPR012320
all species →		DomainStonin homologyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23051
all species →		SOLUTE CARRIER FAMILY 35, MEMBER F5Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016020
all species →		Cellular ComponentmembraneInterproscan
GO:0006886
all species →		Biological Processintracellular protein transportInterproscan
GO:0016192
all species →		Biological Processvesicle-mediated transportInterproscan
GO:0030131
all species →		Cellular Componentclathrin adaptor complexInterproscan
GO:0006897
all species →		Biological ProcessendocytosisInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_016743-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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