Detailed information of FUN_016774-T1 in Acropora pulchra

Genomic Location: ptg000011l:7314326...7331790
NR annotation: XP_015773900.1, PREDICTED: tetratricopeptide repeat protein 28-like [Acropora digitifera]
Species Acropora pulchra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q80XJ3Tetratricopeptide repeat protein 28 OS=Mus musculus OX=10090 GN=Ttc28 PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000014 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12862
all species →
ANAPC5Anaphase-promoting complex subunit 5RepeatInterproscan
PF13181
all species →
TPR_8Tetratricopeptide repeatRepeatInterproscan
PF12770
all species →
CHATCHAT domainDomainInterproscan
PF13424
all species →
TPR_12Tetratricopeptide repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011990
all species →
Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR052699
all species →
FamilyRegulatory & Mitotic Spindle AssociatedInterproscan
IPR019734
all species →
RepeatTetratricopeptide repeatInterproscan
IPR026000
all species →
DomainAnaphase-promoting complex subunit 5 domainInterproscan
IPR024983
all species →
DomainCHAT domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10098
all species →
RAPSYN-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_016774-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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