Gene detail

Detailed information of FUN_016775-T1 in Acropora pulchra

Genomic Location: ptg000011l:7337669...7341116
NR annotation: XP_015749008.1, PREDICTED: uncharacterized protein LOC107328774 isoform X2 [Acropora digitifera]
Species abbreviation APULC · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001645 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13365 all species →	Trypsin_2	Trypsin-like peptidase domain	Domain	Interproscan
PF00531 all species →	Death	Death domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR009003 all species →	Homologous_superfamily	Peptidase S1, PA clan	Interproscan
IPR011029 all species →	Homologous_superfamily	Death-like domain superfamily	Interproscan
IPR000488 all species →	Domain	Death domain	Interproscan
IPR043504 all species →	Homologous_superfamily	Peptidase S1, PA clan, chymotrypsin-like fold	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR36234 all species →	LYSYL ENDOPEPTIDASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0007165 all species →	Biological Process	signal transduction	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K01974	RTCA, rtcA; RNA 3'-terminal phosphate cyclase (ATP)	EC:6.5.1.4	Enzymes with EC numbers	-	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.