Gene detail

Detailed information of FUN_016779-T1 in Acropora pulchra

Genomic Location: ptg000011l:7395337...7407839
NR annotation: XP_015762410.1, PREDICTED: serine/threonine-protein kinase PAK 7-like [Acropora digitifera]
Species abbreviation APULC · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

FUN_016779-T1

GTTTGCTCTTTCTTGTCGATCTCAATTAGCGATGAGAGCAAGAAATTTCGTGTGGAACAAAGTACGAATACAGGCATTCTTAGATGTCATGATGAAGGTGACCTTGGCAACGGGTTATGAACTGTTTACAATGAGGAGGTCACGTGTCGTGCTGTTGCAAGAGTAGCATATCGAGTCGGGAGTATTCGGTTTCCGGCGGACACCATGGAGAGACGAGAGCCCTATACAATGCGAAGGCAAAGTTTCCACGAAAACCTTGTATGATTGTACCCAACGGTGGATCAACAGCGCTAGAGAAAGCTGATTTGATATTCAATCTCTTACGGTGCGCAGGTTTGTGTCGGGGCATCCATTAGCTACAAAAATGTTAAAACGTCTGTTCATCAAGAAACGCAGACGAGTTGAGATCTCGGAACCACACAACTTCGAGCATCGATTTCATACAGGCTATGACAAGGAGAGTGGCAAGTTTCATGGTCTACCGCCGCAATGGGAAGCTTTGCTTGGCTTAAAGAGAGATTCTCCAAAACGACCAAAGCCGATTGTCGATCCTGAAATCATCACACAAGTTTCACCCATTCGAAAATCCCAGTGGAATTTAATGACCTCTGGAAAGCCAGATGCGAGATTTATTTCCGTATCTCGGTCCAATTCACTTCGAAATTCGTTCCGAGGCACTCCTAACGCCAGACCAATCTCAAAGAAACGCGAAAGGTTAACTTCTGGGGAAGAAGAAATCAAATTTAGTCGAGCATCAAACGGCAATGTTCCGCAGGCGAAAGTTCGCGAACAGAATATCAACCGACGCCGATTTTCCCAAGGTAGCGAAAGGTCTTACTCTGAAAGAAACTTCAACCAGCGACAAAGTTTTCCATCTATTCAAAGAGAAACATCTGCAAGCTCGGATTACGGCTCTGCTAGTACAGATTCGGCAGGGGAAAATGCTGGCGATGATCTCCGAAGTTCTTCGAAGACGAAACTTATGTACTCTGATTCATTGGTCACTCACGAACAATTTCGCAACGCATTGGAATTAGTCGTCACCTCAAACGAAGCTCCTCATAATCTTGAAAATTTTATTAAAATTGGCGAGGGTTCGACTGGAGTAGTCTGTCTTGCACGAGATAACAAGACGCGAAGGCAAGTGGCTGTGAAAAAAATGGATCTCAAAAAGCAACAACGAAGAGAACTTTTGTTTAACGAGGTTGTGATTATGAGAGATTATCCTCATCCAAACATTGTAGAGATGTATGGCAGTTATCTAGTGGGAGATGAACTTTGGGTTGTTATGGAATTCCTTGAAGGAGGATCCTTAACAGATATCATCACTCACACAAGCTTATCAGAGGAACAGGTTTCTTGCATTTGCCGATCTGTGCTTAAAGCTTTGGCATTCCTCCATCCTCAAGGAGTCATACACAGGGATATAAAAAGTGACAGCATTCTTTTAACTCCTAGTGGACAGGTGAAGCTCTCTGATTTTGGTTTTTGTGCTCAAGTGACAGAGGAAATGCAGAGACGTAAGTCTTTAGTAGGAACTCCTTATTGGATGGCACCAGAAGTTATTTCAAGAAAGCCATATGGCCCAGAGGCTGATATCTGGTCCCTTGGAATCATGGTTCTTGAAATGATTAATGGAGAGCCACCTTATTTCAGTGAGCCTCCATTGCAAGCAATGAGAAAACTAAGAGACTTGGATCCACCAATCACAAGAGCAGATCACGAGGAGATGTCCCCACGACTGCTGTCTTTTCTACAAAGGACTTTGGTGCGTGACCCAGCTCAAAGAGCATCTGCTTTTGAACTCCTGAATCACCCCTTCATTCGCAGCACGTCTAATTCATCATCCTTGGCTGATATGATGAAGAGCTTTCGACACAGTGTTTGTTAGCACTACTGTGACCAATAGGCCACCTTCAAAAATACCATAATACTCTTTGCTTGTCCTCCAAAATTTTGCATAAGCATTGTTTTCATTTTCCCTTGGGACCATTGCAAGTCCCAGGAGAAAATGGAAACAATGTCTATGCAAAATTTGGGAGGACAAACAAAGAGTATTATGGTATTTTTGAAAGT

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8BTW9	Serine/threonine-protein kinase PAK 4 OS=Mus musculus OX=10090 GN=Pak4 PE=1 SV=1
O96013	Serine/threonine-protein kinase PAK 4 OS=Homo sapiens OX=9606 GN=PAK4 PE=1 SV=1
Q9VXE5	Serine/threonine-protein kinase PAK mbt OS=Drosophila melanogaster OX=7227 GN=mbt PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001590 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00786 all species →	PBD	P21-Rho-binding domain	Domain	Interproscan
PF00069 all species →	Pkinase	Protein kinase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000095 all species →	Domain	CRIB domain	Interproscan
IPR050285 all species →	Family	STE20 Serine/Threonine-Protein Kinase	Interproscan
IPR036936 all species →	Homologous_superfamily	CRIB domain superfamily	Interproscan
IPR000719 all species →	Domain	Protein kinase domain	Interproscan
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR033923 all species →	Domain	p21 activated kinase binding domain	Interproscan
IPR017441 all species →	Binding_site	Protein kinase, ATP binding site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR48015 all species →	SERINE/THREONINE-PROTEIN KINASE TAO	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004674 all species →	Molecular Function	protein serine/threonine kinase activity	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan
GO:0023014 all species →	Biological Process	signal transduction	Interproscan
GO:0035556 all species →	Biological Process	intracellular signal transduction	Interproscan
GO:0043408 all species →	Biological Process	regulation of MAPK cascade	Interproscan
GO:0004672 all species →	Molecular Function	protein kinase activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for FUN_016779-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.