Detailed information of FUN_016795-T1 in Acropora pulchra

Genomic Location: ptg000011l:7614638...7619023
NR annotation: XP_044171585.1, pre-mRNA-splicing factor CWC22 homolog [Acropora millepora]
Species abbreviation APULC · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q08C72Pre-mRNA-splicing factor CWC22 homolog OS=Danio rerio OX=7955 GN=cwc22 PE=2 SV=1
Q9HCG8Pre-mRNA-splicing factor CWC22 homolog OS=Homo sapiens OX=9606 GN=CWC22 PE=1 SV=3
Q5RA93Pre-mRNA-splicing factor CWC22 homolog OS=Pongo abelii OX=9601 GN=CWC22 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002984 (this species only)

 Pfam domain
No Pfam domain signature was detected for FUN_016795-T1. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR050781
all species →		FamilyPre-mRNA-splicing factor CWC22Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR18034
all species →		CELL CYCLE CONTROL PROTEIN CWF22-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000398
all species →		Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0003723
all species →		Molecular FunctionRNA bindingInterproscan
GO:0071013
all species →		Cellular Componentcatalytic step 2 spliceosomeInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_016795-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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