Detailed information of FUN_016876-T1 in Acropora pulchra

Genomic Location: ptg000011l:8338485...8342476
NR annotation: XP_015772440.1, PREDICTED: rhamnosyl O-methyltransferase-like [Acropora digitifera]
Species Acropora pulchra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q7TXJ7Rhamnosyl O-methyltransferase OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) OX=233413 GN=BQ2027_MB2983C PE=3 SV=1
A1KMV3Rhamnosyl O-methyltransferase OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) OX=410289 GN=BCG_2980c PE=3 SV=1
A5U6W7Rhamnosyl O-methyltransferase OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) OX=419947 GN=MRA_2986 PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001012 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04989
all species →
RMNT_CmcIRhamnosyl O-methyltransferase/CmcIFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR029063
all species →
Homologous_superfamilyS-adenosyl-L-methionine-dependent methyltransferase superfamilyInterproscan
IPR007072
all species →
FamilyRhamnosyl O-methyltransferaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR40048
all species →
RHAMNOSYL O-METHYLTRANSFERASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005886
all species →
Cellular Componentplasma membraneInterproscan
GO:0030206
all species →
Biological Processchondroitin sulfate biosynthetic processInterproscan
GO:0071770
all species →
Biological ProcessDIM/DIP cell wall layer assemblyInterproscan
GO:0008168
all species →
Molecular Functionmethyltransferase activityInterproscan
GO:0008610
all species →
Biological Processlipid biosynthetic processInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_016876-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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