Detailed information of FUN_017045-T2 in Dendrogyra cylindrus

Genomic Location: contig_28:3386604...3414290
NR annotation: XP_020602830.1, dTDP-glucose 4,6-dehydratase-like isoform X1 [Orbicella faveolata]
Species Dendrogyra cylindrus · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q0P8I7GDP-D-glycero-alpha-D-manno-heptose dehydrogenase OS=Campylobacter jejuni subsp. jejuni serotype O:2 (strain ATCC 700819 / NCTC 11168) OX=192222 GN=Cj1427c PE=1 SV=1
Q9L9E8dTDP-glucose 4,6-dehydratase OS=Streptomyces niveus OX=193462 GN=novT PE=3 SV=1
Q57664Putative UDP-glucose 4-epimerase OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) OX=243232 GN=MJ0211 PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003952 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01370
all species →		EpimeraseNAD dependent epimerase/dehydratase familyFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050177
all species →		FamilyBifunctional lipid A modification and metabolic enzymesInterproscan
IPR036291
all species →		Homologous_superfamilyNAD(P)-binding domain superfamilyInterproscan
IPR001509
all species →		DomainNAD-dependent epimerase/dehydrataseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43245
all species →		BIFUNCTIONAL POLYMYXIN RESISTANCE PROTEIN ARNAInterproscan

 Gene Ontology
No Gene Ontology signature was detected for FUN_017045-T2. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_017045-T2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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