Gene detail

Detailed information of FUN_017134-T1 in Dendrogyra cylindrus

Genomic Location: contig_28:4501944...4510943
NR annotation: KAJ7360429.1, uri1, prefoldin-like chaperone [Desmophyllum pertusum]
Species abbreviation DCYLI · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q3TLD5	Unconventional prefoldin RPB5 interactor OS=Mus musculus OX=10090 GN=Uri1 PE=1 SV=2
Q3B7M7	Unconventional prefoldin RPB5 interactor OS=Bos taurus OX=9913 GN=URI1 PE=2 SV=1
O94763	Unconventional prefoldin RPB5 interactor 1 OS=Homo sapiens OX=9606 GN=URI1 PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005476 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02996 all species →	Prefoldin	Prefoldin subunit	Coiled-coil	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR052255 all species →	Family	RNA polymerase II subunit 5-mediating protein	Interproscan
IPR004127 all species →	Family	Prefoldin alpha-like	Interproscan
IPR009053 all species →	Homologous_superfamily	Prefoldin	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15111 all species →	RNA POLYMERASE II SUBUNIT 5-MEDIATING PROTEIN NNX3	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000122 all species →	Biological Process	negative regulation of transcription by RNA polymerase II	Interproscan
GO:0003682 all species →	Molecular Function	chromatin binding	Interproscan
GO:0003714 all species →	Molecular Function	transcription corepressor activity	Interproscan
GO:0010923 all species →	Biological Process	negative regulation of phosphatase activity	Interproscan
GO:0019212 all species →	Molecular Function	phosphatase inhibitor activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K17560	URI1; unconventional prefoldin RPB5 interactor 1	-	Protein phosphatases and associated proteins	ko01009	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.