Gene detail

Detailed information of FUN_017293-T1 in Acropora pulchra

Genomic Location: ptg000011l:11708318...11714937
NR annotation: XP_029200947.2, uncharacterized protein LOC114965434 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

FUN_017293-T1

ATGCACATTGACAATGCCATTCCTTCTTTTGTTAGGTTTGGACGCTGCCTTGTGCGCACCTCGTATGTTGGACAGCAGCGGACATGCAGACCATGTAAACCACCTGGTCACCAAGCCAGGGCATGCAAGTTTAAAATTTGTTTCAACTGCGATCACGTTGGTCATGAAGCTCATGATTATGAGAATGACATCCTTTGCAGTATCTGCAAAGAACCTACTCACTTAGCTAAGTATTGTCCTTACGGCTGGAATTCTCCTCAAGACCGTGATGTACCTGTTGAAGAGCGTCCTGAAGTACCTCCTATGTCTAAACCTGTTGAACCTGATCTACAACCTTCCCAAGAGCTTTTTCCACAACCTCCTTCTTCGCATGATTTGCCTCTACAGTCTTCGCAGTCTTCGCAATCTTCGTCGTCCACTCAGTCTTCCCCTACTTCTGCATCTGGTTCTCCTTCATTTTCTCCAGTTCCTGAAATTTCTCAAGAGTCTTCCTCATCTGCTGATGATTCCAATGACGATGATCCAGTTGAAAAGGTAATGGATTCTCTGCCTCCACCGAATGCTGTAACGGCTTCTGATGAAGAAATGACTCATGTTATTTCTGATCCAGATCTACTCAACTCATCCGCACAATGCACTGATGTTGAGCTTGACCCAGATTTGTTCAACACAAAAAGACCTGCTGAAAAGTCAAACTGTGAGTTAGATGAAGTTAACCTTCTTGCCTCTTTAATCCGTCGTTCTCCAGAGATTGAGGGTTTTCTCTTGCCCGGTGCTAATGGCCTACAGGCTTGTGCTCGCCTTTATGCTGACGATGTTTTTGCCGTATTGAAGAATTTGAAGTCCTTAGAGGCTTTACTTTCTTTCATTGAATTGTATGACAAAGGCACAGGAAGACAAGGTTACGTGACATGCAAAAGATTAGGTTGGGACACTCTTCTTTGTTGTGTGTGTGTGTCTGCCATTGCCACGGACACTCCATTGCAGTGTTTTCTGGACTTTGAATGTGTTCTATTTGTCTTATCTTGTCTCCGTGTTGGCTGGAGAATTGTGTTTTGGATGTCACAAATGTCAAACGTTAATGGAATTGAACAGCACGCGCAGTTATCACGCTAGCGCGCGCGCGCCATTGCAAATGACTGCAAAAAGGAGATTTGATTTGAGAAACAACTGGCGCTCGTTTGCTTGCTTGCACGCTGGTCTGGCAACCGTTGGAAAAAAAATGTTGTACAAGTAAAATGAGTTAATACAGTGAGTTATCGTTGTGTAATAGTTACATGTCGGGTGATGGCAGGGAACAAAACAAGGAAGCCTACGACATGGGGTATTCCCAGGCGGTCACCCATCCAAGTACTAACCCCGCCCGACAGAGCTTAACTTCGGTGATCGGACGAGAACGGTTTTTTTTTTTTTTCTTTTAATTTTTTTTTATTTCTAAAGAGCTTGAAAGCGAGCCTTTTCTAATTACATATTATTTTCTACTCAGGTAGATGTAGCAATGTTCAATAATTTGTGAGTTACAGTTTTACAACCTTTTTCTTATGAATTTGACAATTCTTTTGCATCGTAATTCAAGCTATGTATGGTGTTGTTTTAAGTACAATATTGCAACTATTGTTTCTATCTAACAGGTGTTTTGAATTATATTAATAGTTTTTTTTAGATTACAATATTGCGACAAAAAGTTGTTGAGCATTTGTAATATTGTTTGTATTTCATAGGTTTTCTTATTTCATGTTATAGAAAATTTTACTTTTCTGTCTTATTTTCTTTTTTACAGGTGTAAAACAAGGTTGTTGTCATTGATTGAGTGACGCCAGTGCTGAGCCTATGCACCAAGTAGAGGTGAATGTATCATCCTGTTGAGAGCTGGAATATTTGTGAGTAAAAGCGATGTGTGCTTTTACGAAGGCTGAAAAAAGTTCTTGGGGTGAGGTAATAATTTGTTTTGTGCGGTAGTTCACTGCAGACTTATGTATCACGCAGCGTGCAGTGGTCAATGTCCAATTTACTAAATTCAGTAAGTCTTTGTTGTGGATAATGTTGTTAGGTTGTGTGAGTCCAAAAATTTTAATACTGTCTGTGAGCTGTAGCTTGTTGTTAGTCATCTTGTCAAAGTAGCTTTGAAGTTTGGTCCAGAGTGGTATAGATGTTGGGCAATGAAGAAATAGGT

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
--	--	--	--	--

InterPro

InterPro term	Type	Description	Source
IPR036875	Homologous_superfamily	Zinc finger, CCHC-type superfamily	Interproscan
IPR042509	Family	Zinc finger CCHC domain-containing protein 3	Interproscan
IPR001878	Domain	Zinc finger, CCHC-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22639	GAG-RELATED PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0002218	Biological Process	activation of innate immune response	Interproscan
GO:0003690	Molecular Function	double-stranded DNA binding	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan