Detailed information of FUN_017416-T2 in Dendrogyra cylindrus

Genomic Location: contig_29:3334096...3346518
NR annotation: XP_020606996.1, protein SDE2 homolog [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q07G43Splicing regulator SDE2 OS=Xenopus tropicalis OX=8364 GN=sde2 PE=2 SV=1
Q6IQ49Splicing regulator SDE2 OS=Homo sapiens OX=9606 GN=SDE2 PE=1 SV=1
Q5RET9Splicing regulator SDE2 OS=Pongo abelii OX=9601 GN=SDE2 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13019Sde2_N_UbiSilencing defective 2 N-terminal ubiquitin domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR051421FamilyRNA Processing and DNA Damage Response RegulatorInterproscan
IPR024974DomainSde2, N-terminal ubiquitin domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12786SPLICING FACTOR SF3A-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005634Cellular ComponentnucleusInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K25059SDE2; replication stress response regulator SDE2-DNA repair and recombination proteinsko03400deepkoala

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