Gene detail

Detailed information of FUN_017602-T2 in Dendrogyra cylindrus

Genomic Location: contig_30:1075319...1120337
NR annotation: CAH3147100.1, unnamed protein product [Pocillopora meandrina]
Species Dendrogyra cylindrus · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

FUN_017602-T2

AAAAACGTTTTGTAGTCTGCGATCAAGAATGTCGAAAATACGGTAGCCAGTATCTACAAGAGACGATTGGATTTGCATGGATCAATGTTATTGATGCGACCAGACATTGCGGCTGATTGACAGTCCCCGGATCACTAACTACGTCAAGAGTTTCACACATATCAGTTTCACACATATCAGTTTCGCACGTTTGCGTATCACGACTGAAGGGTTGCCTTCAATACCAAAAGGATCCTCGTTATACAGTCGATTTGACGAGAATATTATTACTTCAGCAAGAAGACAGTGAAAATATCCTGACCACAATGTTAATTGGATTGGTGTTCATCGGGAGCTTTGTAGTGACGTTTTCTCCAGCCCTGTCTCTTTCCTGTATTCCATGCTCATGGGTGCGGTGTGCAGCTCCTGTGGATTGTAAGGGAGGCTTGGTGAAGTCCATCTGTGGCTGCTGTAGTGTTTGTGCCAAGGTAGAAGGAGAGAGATGTGGTGGGCAGTGGCAGACGCTGGGACGCTGTGACTCTGGTCTGAAATGTGTGGTGAGGGATGGACGTCTCAAGGCAGGAGCAGGCACATGTGAACCTGCTGTTTGCAAGGGGAAAAAGTGTGGTTTCCGTGAGGTTTGCAGTCTAGGGAATGATGGTTTTCCTTTCTGCACCTGCCCTCAAGCCTGTAATGGCTACAAGCATAAGCCAGTATGTGGATACTCTAATGGCAAGCAGTACAGCAATGAATGTGAATTGTACAAAGAGGAGTGTGATTCTGCTAAAACTATAGGAGTCATGGCAGGACCTTGTAAAAAGTGTCTTGATGGAACAAAGACATATTTATTTGGTGAAACAAGAACAGGGAAAAACCCATGTGAACAGTGCACTTGTTTTCATGGAGAATGGAAATGCCGTACTACAGCCCAGTGTGAACCGTCAAAGTCAAGAAGTTGTACAGCTGCTGTAGATACGCTGGGTAGAATGCTCCGGTCAGATTGTCCCAAAGGCTATTGGTGCAAAGTTCAGATACCAGGTATTCCAGAGGCTGGCATTCCAGACGTAGCTGTGTGCACACCTGGACATCCAACAAACACAGAAGCAGCTGGTGAAATGTTAACTTCAACAGTGTCCTCACCAACTTCACATTTGCAAGGTAAAGTGCCTCAGCAGTGTTTGTTACCACACAGTGAAGGCCCATGCAGAGCTGCATTTCGTCGTTGGTATTACAataaagaaaagggaaaatgcATGGTCTTTGTGTATGGTGGATGTGAAGGAAATGCCAATAACTTTTACACCAAACCAGCTTGCAAACTTGTCTGCATGCAACGAAACACAAGTTCTGTGCAAGGTATTAAACAGACACATCCTCCAGAAATTGGAAACACCAAAACACCAGTTGCTTCATTGTCAACAACTTCTGTATATAGCTTGACTTCTTCCACCACTGCCCCGGTTACCTCAGCTGTAACGTTCAAATGTCGCTGCTCAAATTGTTCTGGTCAAGATAGATGTGCCACAGTTGTTGGGTGCTTCACCATAGTCAATCACACAACTGGAGGTGTAAGGCAAACAGAAAAAGGATGTTTTGCTAACTCAGAGGAATATAGAGTACAGTGTACAAGTCAGGAAGGTAACAACCACACAGTGGAATGCTGCAAACAGGACATGTGCAATGACTTCACAATCTCTGATGAAAGCAATGAGCAGAAACAAGTGAAGGACCCTACAACATTGCCAACAACAAGGCCTTACATCGCAAAATGTCATGACTCACCAAGCAACAAGTTTTATGGTGAGGCAGAATCTTGGGAGCCAAATGATTGTACCGTTTGTGTGTGCCGTAATGGCACACCAGAGTGCCTGGCAACAGTATGCCGTCACCCAGACTGTAAAGAACCTTTGTATATTAAGGGGCAGTGCTGCCCTGTGTGCCCCTTGGTTGACCCCAGCTCTTCAGGGCATAATGAGGCAGATCTCATCAAAGCTTTCGCGGAAAACAAGCTGGACACAGTATTAGTGAGCATTAATCATGGTCAAAAGCAAGATGTGTGCCGGGACATTCGTTCAGGCCAGTTTTACCTGGTGGGTCAGAGTTGGCAGTTGGACCAGTGTACAACATGTTACTGTGGCAAAAGTGGCAAAGCAGCATGTGCAGTGCAGATGTGTGAAAGAGATCCTCAGTGCAAGGATCTCCTTCGTGATAACAGTCAGTGCTGTCCAAAGTGCGGGGATGAGAATGGTAGACAACTCATTGATTTCATATACTGGTGTTTTCTTATTACACTTTGCATGGTTTTCAAGTAGAAAATGCAATAATTTGCAAATCCATCATTACTGATGATAGAAGATCTgtggatttttttttgaaaacttcagTGGGAGGCACCTTACCGTGGCCACCCAACATTTTTACAAGTTAGCCAATAAGGTTGCACGATTATGATTGACGGCCACACCTCCTTACAAAgtttcaaaaatataatttacgcACAAATGGGAAACATTTCACAGTCAAAACTTCTCTTGTGtacctatcaagggtgaattcaTGAATTCATTTAAATGGCAATTCAATTTCATTCTGTGCTTCaatgttccattcttgaagtgaatatttca

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
B2G331	TauPI-stichotoxin-Hcr2b OS=Radianthus crispa OX=3122430 PE=1 SV=1
P0DN10	U-actitoxin-Avd3i OS=Anemonia viridis OX=51769 PE=3 SV=1
Q90WA0	Kunitz-type serine protease inhibitor textilinin-2 OS=Pseudonaja textilis textilis OX=169397 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000733 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00093 all species →	VWC	von Willebrand factor type C domain	Domain	Interproscan
PF00014 all species →	Kunitz_BPTI	Kunitz/Bovine pancreatic trypsin inhibitor domain	Domain	Interproscan
PF00219 all species →	IGFBP	Insulin-like growth factor binding protein	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036880 all species →	Homologous_superfamily	Pancreatic trypsin inhibitor Kunitz domain superfamily	Interproscan
IPR001007 all species →	Domain	VWFC domain	Interproscan
IPR009030 all species →	Homologous_superfamily	Growth factor receptor cysteine-rich domain superfamily	Interproscan
IPR000867 all species →	Domain	Insulin-like growth factor-binding protein, IGFBP	Interproscan
IPR002350 all species →	Domain	Kazal domain	Interproscan
IPR002223 all species →	Domain	Pancreatic trypsin inhibitor Kunitz domain	Interproscan
IPR045860 all species →	Homologous_superfamily	Snake toxin-like superfamily	Interproscan
IPR036058 all species →	Homologous_superfamily	Kazal domain superfamily	Interproscan
IPR020901 all species →	Conserved_site	Proteinase inhibitor I2, Kunitz, conserved site	Interproscan
IPR051388 all species →	Family	Serine protease inhibitor and venom toxin	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46751 all species →	EPPIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004867 all species →	Molecular Function	serine-type endopeptidase inhibitor activity	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005576 all species →	Cellular Component	extracellular region	Interproscan
GO:0005615 all species →	Cellular Component	extracellular space	Interproscan
GO:0010466 all species →	Biological Process	negative regulation of peptidase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for FUN_017602-T2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.