Gene detail

Detailed information of FUN_017793-T1 in Dendrogyra cylindrus

Genomic Location: contig_31:455825...458273
NR annotation: KAJ7385134.1, Hs6st1p [Desmophyllum pertusum]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

FUN_017793-T1

AGGTAAACCCGAGTTGCGAAAAGGAATTTCTGACAAGAGGGGTGACCCGGGCTGGAAGAATTTTTTTCGTGAAAACGCATCGCCTGCGAACAAACTGAGAAGCGAGATGGCGATCACGGCCTGGGGGATGGGAGAGAGGCCGGCCACGCTGGGCTCGCTAAACCAAGGTCATGTGACCGCCAGCTGCAAAATGCGATCAGTTTGAAATATGATGCCTCGGGTGTAGATATAGTTTATCGCCCTCGTGCCTTCAGAGTATGGTAATTGGGTTCGATAATTATCGAGTTGAAAGCCGAATCAATTTGGACAGACTCTTATTTGACAAGTGACAGATGCTTTGACTACCCAGTGGCAAATGCTTTTAATGTCAGGCGTGTTACAGCGATTGAGCTTTAGATAAACTGAAAACAGGAACTTCAGCTATTCACAGAACTATTTATTTTCTTGTGTTTTGACATGCATGATACACGGACCGGAAGCCGAACGCGCCAAGAGTTGCGCCTCCTTTCAAAGACCAAGGAAGACGAGGAAATGAAACCCACCAAAAGTTTCAATTCTCTATGAGCACCTGTGTTTTGTGCATAATAAGTAGCATTCTTGTGGTTTTCTTAACCTTATCGTAGcgaaaattcaagtttgcgtgacCACATTTGTTTTTCCGTGATGAAAAGCAAGCATGCAACGAGCGAAACGGTGCTAGAAATTAGtgtcaaatttcaaaatttcattttcGAATGAGTGCCGGTCGTCAGTTTCAGCTATAAAACGCCACAAGCCTACCGTATTACTGCGTATTAAAGGGTCAAAAGGCATAGAAGCTTAGAAAACAGAGCTACTTCTAACGTAATCGACGATTTTGGTGCAGGAAGTCAATGCGTTCGTATGAAAATGGTCTTCAGGTGTGCATGTGGTGGAGGattgaatttgaaaaaaaatgttttcgctGCAATTCTTCTTGCTACGACAGGATCCGTCGTTTTGATGGCTTTCAAATTAATACCTTTGCGAAGGTTTTACGCTGTTCAAGAGATTGCCGTCGTGAACGCAACTGAAATGGACACGACCCGGACCGTGCGACAGCACAAGTTTGACATGAGAGGGAATGATGTTATGGTTTACTTGCACATTCAAAAGACCGGAGGATCACGATTTGGCGCTCAGCTAGTGAATAACTTAGACATAGAGCGGCCGTGCGTTTGCTCGAGGAAAAGACGAGGCAGCCTCCAAACACAAGCAACCAAACAGCAAACTAAACCCCCTCGCGTGTGCCACTGCTATCGACCAGGCTCGAAAAAGATTTGGCTGTTTTCCCGGCACCATTTAGGTTGGCCGTGCGGGTTGCACGCCGACTGGACGGAGCACCACGAGTGTGTCGCAAAATACATGAACAAACGCGAGGGTCGAAACGCTAGGCGAAAATTCATGTACATTACGATCATACGGGAGCCCATTGCAAGGTTCTTGAGTGAATTTGCCTTCGTTCAGTACATGGGCACGATGTGGAGAGGCGCTACTCTTCGCTGCAATGGTCGATCGCCTTCAAAGAAAGAACTTCCACCGTGCTTCACAAGAGACGATCTTAGCGATGTCACCTTCGGGGAATTTATCGGGTGCCCTTGGAATCTCGCTTTCAATCGTCAAACCAGAATGCTGGCCGATCTACGGCAGGTAAACTGTTACAATACAACTGGAATGTCTCCATCAAAACGGGGAAAGCTCATGCTTGAAAGTGCGAGGAAAAATCTGCAGGAAATGGCTTTCTTTGGCCTCACTGAATATCAGGAGGAGAGCCAGTACTTGTTCGAGAAAACATTTGGGTTGAAATTCGTTACCCCCTTTACGCAATTGACTGAGGACGAAACACGAGCCGGAAATATATTGCCAGAGCTGAACAGTTCTCAGTTGAGTCAAATAAAAATGTTGAACTCGCTAGACATAGAGCTTTATACGTTCGCTAAAAACTTGTTTTTTAAGCGCTTAACACACTTCAAAGAGGAAAATAGAATTAAAATGGAATAAGAAACTGAATAAACATGGTTACTATCCCGTTTCGTTTACTAATTAcgttaaacatgttaaaagctCATTGAATCACGAATCGCGAATCGTGCGATAACGAGGCCATAGCGAATTGCCGGCATTTGAATCGTGAGAGTAGAACATTTCGCTCGTTTGTAAACAGACAACGAGCAGCCCCTGTTTTTTCGCGGTCTAATTTTCGCGCGGTCatttgtggtttttttttttttttgcttcatggtctacggactgcgaaaaaaggCGCTGCTCGTTGTCTCGTTTGTAAACACTTTTGTCTGTACAGTcgaagctcccgtaagcggacaccctcgggacgcgaaaaaagtgtccgtaactggagctggccgcttaggagaatggttctcgtaagcggcacTAGAGGTataggggatagatggccgcttacggg

Protein

Uniprot

Uniprot term	Description
A0MGZ7	Heparan-sulfate 6-O-sulfotransferase 3-B OS=Danio rerio OX=7955 GN=hs6st3b PE=1 SV=1
Q91ZB4	Heparan-sulfate 6-O-sulfotransferase 1 OS=Cricetulus griseus OX=10029 GN=HS6ST1 PE=1 SV=3
Q9QYK5	Heparan-sulfate 6-O-sulfotransferase 1 OS=Mus musculus OX=10090 GN=Hs6st1 PE=1 SV=4

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03567	Sulfotransfer_2	Sulfotransferase family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR010635	Family	Heparan sulphate 6-sulfotransferase/Protein-tyrosine sulfotransferase	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR005331	Family	Sulfotransferase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12812	HEPARAN SULFATE 6-O-SULFOTRANSFERASE 3	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0008146	Molecular Function	sulfotransferase activity	Interproscan
GO:0015015	Biological Process	heparan sulfate proteoglycan biosynthetic process, enzymatic modification	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0017095	Molecular Function	heparan sulfate 6-O-sulfotransferase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K02514	HS6ST1; heparan sulfate 6-O-sulfotransferase HS6ST1	EC:2.8.2.-	Glycosyltransferases	ko01003	deepkoala