Gene detail

Detailed information of FUN_017859-T1 in Colpophyllia natans

Genomic Location: contig_30:916912...926839
NR annotation: XP_020601502.1, E3 ubiquitin-protein ligase RNF13-like [Orbicella faveolata]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
Q0VD51	E3 ubiquitin-protein ligase RNF13 OS=Bos taurus OX=9913 GN=RNF13 PE=2 SV=1
O54965	E3 ubiquitin-protein ligase RNF13 OS=Mus musculus OX=10090 GN=Rnf13 PE=1 SV=2
Q66HG0	E3 ubiquitin-protein ligase RNF13 OS=Rattus norvegicus OX=10116 GN=Rnf13 PE=2 SV=1

Gene family	Subfamily
Ubiquitin Family	E3\|E3 activity RING\|RING

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02225	PA	PA domain	Family	Interproscan
PF13639	zf-RING_2	Ring finger domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR051653	Family	E3 ubiquitin-protein ligase and sorting receptor	Interproscan
IPR003137	Domain	PA domain	Interproscan
IPR001841	Domain	Zinc finger, RING-type	Interproscan
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47168	RING ZINC FINGER DOMAIN SUPERFAMILY PROTEIN-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
-	-	-	-

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K15692	RNF13, RZF; E3 ubiquitin-protein ligase RNF13	EC:2.3.2.27	Ubiquitin system	ko04121	deepkoala