Gene detail

Detailed information of FUN_017882-T1 in Acropora pulchra

Genomic Location: ptg000012l:1549916...1568876
NR annotation: XP_044183642.1, serine/threonine-protein kinase MRCK alpha-like [Acropora millepora]
Species abbreviation APULC · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

FUN_017882-T1

ATGAAAGACGTCAACGAGTGCAACGAATGCAGCAAGTTTGCATTTCATGTTGCAGTACTGGCATTGACGTGTTTTTATGTTCTTTCTTTAGTGTGTCAGTACGCGTGTCACGTTACTTGTATTGATCAAGTACCGCCTGTTTGCTCAATACCAAACCGTCAAGCTAATAGACGTCCTCTTGGAATCGATCCCGAGACGGGAAGAGGAACAGCTATTGAAGGAATTGTAAAGATTCCAAAACCCGGCGGCATCAAGAAAGGCTGGCTACGACAATGGGCAGTCGTGTGTGATTTCAAACTCTTCTTGTTTGATGTATCGGGGGATAAACCGCCACAAGTATCTCAATCCGCGACTCAAGTCATTGATATGAGAGATGAAGAGTTTTCCGTTAGCAGTGTACTGCAATCAGATGTGATACACGCCAATAGGAAAGAGCTGAATTGCATTTTCAGGGTGACAGCATCTCAGATGACTCCACCAGGAGAATCCCTAACGCAACTGATACTGACAGACAGCGACACTGAGCGAGTGCGGTGGGTCAGTGCTCTACAAGAGCTTCACAAAGCTTTAAAGAAGAATAGCAATTTGTATAAGAGGCAAATCTACCAAGCCAAGGAGGTGATAGAATCCAATGTTCAAATCAGGCAAGCACTTTGCGCAACAATTATCGACACTGACAGAGTGTGTCTGGGAACAGAAGATGGCTTATTCTGCATAGAACTAATGAAAGAAAGCACATCTCGCATTGGTGACAATAAAAAGGTTTCACAAATCGAAATGTTGCCAGATGAACAACTGCTCGTCCTTATTTCAGGAAGAAATCGTCAAATCCGACTCTACCCTCTTTCTGCCGTGGACGGTCACGAAACGGAACCAATCAAAATCAATGAAGCGAAGAACTGTATCATGTTTGCTACTGGTTCTCATGACAACAGTGCCAGCTGCCTTTGCGTAGCGCTGAAGCGACAGATTCTCATATATGAGCTCAACAGATCGAAACAAAGGCATCATAGACTGAAGGACGTTCCGGTGAACTATAATATCCAGTGGCTTGGAGTCTCTTTTGGAAAGCTTCTTGTTGGATACAACTCGGGCTTCTGTATTCACAGTTTGACGGTAGAGGGGAGACCTCAAAAACTAGTGAATTCAGATGATCCTACTTTGAATTTTCTAACCAATAACACACTGGACGCTTTGCTGGCAGTGGAAATTGCGCCCCAAAAGGAGTTCCTGTTATGTTTCAATTTGCTTGGTGTGTTTGTGGAGGCCAGTGGATATCGGTCGAGGCGGTACGAGCTGATGTGGCCATCGCCACCTAATGGTGTCGCATACTCTCATCCCTTCGTGATATCCTTCAGTGAGAGGGCGATTGACGTGTTTGACTCGGGTTCTGCGGAATGGCTTCAAACGATTCCACTCAAAAAGTGTCACGCCCTGATTAGTGACGGATCCCTGGCGCTGTGCACTGCCTTGGAACAGTGCAACTTACTATATCTAAGAAATAAACTATATGAAGAAGAGGAGTTAATTATTCCGGATCCGACCAAAGGGAAGAGGGCTCTTGCTGCCATATTACGGCTAAAAAACAAGAGAGGGAGTACCTATCGATTTGGTTTCAGGACGAGGGAGGGAGGACTGGCAGACATGGATGCCAATGCTCGCTCCAAGCTGATATCGGCCCCAACCAATTTCAACCATATCTCACATATGGGACCTGGGGACGGCTTTCAAATCATTAAAGACCTACCTACGGATCAGCGTCGTAGTGAAGAGGACGTACCCCCAGTGGTTCCAAGGAACACTTCAGTTGGCCCCAGATCTAAGCGAGCAGCCACAGCCAATCCACACATCATGACGAGGCCAAACGTACCCCCAAGGTCACTGAAACCCGGTCCCTCACCCCAGGGAATGCTTAACGGTCGATCAGCTTCCGTCATTGTTGTCAATAGAGCCGACGACTCTCCTCCAATTAATCGCCCACGGTCCACATCTTCGAGGTCAGTTGAAGATGTTTCAAGTGACCCCCACGTGACCAATGGATCCAACCGGTTGTCCGCCGACCTTGACAACTATGCACAGTACTTCACAACCATGAGACCGAAAAGTGTTGCTGATGAACAGAGACAGCTTGCTGTGGCAATTGAACTTAGCAAACGACACGCCGGTGAAGACAAAAGACGCGGTCGCACACGGGATGTATTAAATCTTCCAGAAAGTGATTCGCCAAGACACTCATCAGGTTCAGGATCCAGCTCAGGTCTTGGTGCCTCGGTAGTAGGTAGCCAAGACGAAGGCGTGACGTCACCAGATTGTGTGCAATTGAATTTTTCAGGTAGTACAAGATTTACAGGCATCGACTAA

Transcript

FUN_017882-T1

TGAGGCAAGGGTCAATATGCGAAGGTACGTGCCATGATCTGCATGCAATTTCTCCTGGTTGTAGTACGGCTCTTTCCTAACTAAAGGTTGGGAAATTTAAGAAAACTGTCATGAAAGACGTCAACGAGTGCAACGAATGCAGCAAGTTTGCATTTCATGTTGCAGTACTGGCATTGACGTGTTTTTATGTTCTTTCTTTAGTGTGTCAGTACGCGTGTCACGTTACTTGTATTGATCAAGTACCGCCTGTTTGCTCAATACCAAACCGTCAAGCTAATAGACGTCCTCTTGGAATCGATCCCGAGACGGGAAGAGGAACAGCTATTGAAGGAATTGTAAAGATTCCAAAACCCGGCGGCATCAAGAAAGGCTGGCTACGACAATGGGCAGTCGTGTGTGATTTCAAACTCTTCTTGTTTGATGTATCGGGGGATAAACCGCCACAAGTATCTCAATCCGCGACTCAAGTCATTGATATGAGAGATGAAGAGTTTTCCGTTAGCAGTGTACTGCAATCAGATGTGATACACGCCAATAGGAAAGAGCTGAATTGCATTTTCAGGGTGACAGCATCTCAGATGACTCCACCAGGAGAATCCCTAACGCAACTGATACTGACAGACAGCGACACTGAGCGAGTGCGGTGGGTCAGTGCTCTACAAGAGCTTCACAAAGCTTTAAAGAAGAATAGCAATTTGTATAAGAGGCAAATCTACCAAGCCAAGGAGGTGATAGAATCCAATGTTCAAATCAGGCAAGCACTTTGCGCAACAATTATCGACACTGACAGAGTGTGTCTGGGAACAGAAGATGGCTTATTCTGCATAGAACTAATGAAAGAAAGCACATCTCGCATTGGTGACAATAAAAAGGTTTCACAAATCGAAATGTTGCCAGATGAACAACTGCTCGTCCTTATTTCAGGAAGAAATCGTCAAATCCGACTCTACCCTCTTTCTGCCGTGGACGGTCACGAAACGGAACCAATCAAAATCAATGAAGCGAAGAACTGTATCATGTTTGCTACTGGTTCTCATGACAACAGTGCCAGCTGCCTTTGCGTAGCGCTGAAGCGACAGATTCTCATATATGAGCTCAACAGATCGAAACAAAGGCATCATAGACTGAAGGACGTTCCGGTGAACTATAATATCCAGTGGCTTGGAGTCTCTTTTGGAAAGCTTCTTGTTGGATACAACTCGGGCTTCTGTATTCACAGTTTGACGGTAGAGGGGAGACCTCAAAAACTAGTGAATTCAGATGATCCTACTTTGAATTTTCTAACCAATAACACACTGGACGCTTTGCTGGCAGTGGAAATTGCGCCCCAAAAGGAGTTCCTGTTATGTTTCAATTTGCTTGGTGTGTTTGTGGAGGCCAGTGGATATCGGTCGAGGCGGTACGAGCTGATGTGGCCATCGCCACCTAATGGTGTCGCATACTCTCATCCCTTCGTGATATCCTTCAGTGAGAGGGCGATTGACGTGTTTGACTCGGGTTCTGCGGAATGGCTTCAAACGATTCCACTCAAAAAGTGTCACGCCCTGATTAGTGACGGATCCCTGGCGCTGTGCACTGCCTTGGAACAGTGCAACTTACTATATCTAAGAAATAAACTATATGAAGAAGAGGAGTTAATTATTCCGGATCCGACCAAAGGGAAGAGGGCTCTTGCTGCCATATTACGGCTAAAAAACAAGAGAGGGAGTACCTATCGATTTGGTTTCAGGACGAGGGAGGGAGGACTGGCAGACATGGATGCCAATGCTCGCTCCAAGCTGATATCGGCCCCAACCAATTTCAACCATATCTCACATATGGGACCTGGGGACGGCTTTCAAATCATTAAAGACCTACCTACGGATCAGCGTCGTAGTGAAGAGGACGTACCCCCAGTGGTTCCAAGGAACACTTCAGTTGGCCCCAGATCTAAGCGAGCAGCCACAGCCAATCCACACATCATGACGAGGCCAAACGTACCCCCAAGGTCACTGAAACCCGGTCCCTCACCCCAGGGAATGCTTAACGGTCGATCAGCTTCCGTCATTGTTGTCAATAGAGCCGACGACTCTCCTCCAATTAATCGCCCACGGTCCACATCTTCGAGGTCAGTTGAAGATGTTTCAAGTGACCCCCACGTGACCAATGGATCCAACCGGTTGTCCGCCGACCTTGACAACTATGCACAGTACTTCACAACCATGAGACCGAAAAGTGTTGCTGATGAACAGAGACAGCTTGCTGTGGCAATTGAACTTAGCAAACGACACGCCGGTGAAGACAAAAGACGCGGTCGCACACGGGATGTATTAAATCTTCCAGAAAGTGATTCGCCAAGACACTCATCAGGTTCAGGATCCAGCTCAGGTCTTGGTGCCTCGGTAGTAGGTAGCCAAGACGAAGGCGTGACGTCACCAGATTGTGTGCAATTGAATTTTTCAGGTAGTACAAGATTTACAGGCATCGACTAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O54874	Serine/threonine-protein kinase MRCK alpha OS=Rattus norvegicus OX=10116 GN=Cdc42bpa PE=1 SV=1
Q3UU96	Serine/threonine-protein kinase MRCK alpha OS=Mus musculus OX=10090 GN=Cdc42bpa PE=1 SV=2
Q5VT25	Serine/threonine-protein kinase MRCK alpha OS=Homo sapiens OX=9606 GN=CDC42BPA PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002051 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00780 all species →	CNH	CNH domain	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011993 all species →	Homologous_superfamily	PH-like domain superfamily	Interproscan
IPR001180 all species →	Domain	Citron homology (CNH) domain	Interproscan
IPR001849 all species →	Domain	Pleckstrin homology domain	Interproscan
IPR000095 all species →	Domain	CRIB domain	Interproscan
IPR050839 all species →	Family	Rho-associated Serine/Threonine Kinase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22988 all species →	MYOTONIC DYSTROPHY S/T KINASE-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004674 all species →	Molecular Function	protein serine/threonine kinase activity	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0005856 all species →	Cellular Component	cytoskeleton	Interproscan
GO:0018107 all species →	Biological Process	peptidyl-threonine phosphorylation	Interproscan
GO:0031032 all species →	Biological Process	actomyosin structure organization	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for FUN_017882-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.