Gene detail

Detailed information of FUN_017883-T1 in Acropora pulchra

Genomic Location: ptg000012l:1569714...1590411
NR annotation: XP_044183642.1, serine/threonine-protein kinase MRCK alpha-like [Acropora millepora]
Species abbreviation APULC · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

FUN_017883-T1

ATGGCTACTGAAGCGGCGTTGGAGAGGCTAAAGCAACTTGAAGCTCTGTTCTCGTATGGAAGCAGCGAGAAAGGATCGTATAGTGTAGAAACATTATTAGATGTTCTGCTTTTACTCTACGATGAATGCTGCAATTCTACTTTAAGGAGAGATAAAAATGTCAGTGAATTTATTGAGCATGTCAAGCCGGTAGCAAGTAGAATTAAACAACTTAGGCTTCGACGTGACGACTTCGATCCACTGAATTTAATCGGAAAGGGGGCTTTCGGCGAGGTTACGGTGGTTCGAATGAAAGCCAATGATAAAATATACGCGATGAAGACTTTGAATAAATGGGAGATGTTGAAACGAGCAGAGACAGCATGTTTTAAAGAGGAAAGAGATGTGCTGGTTTATGGTGATAAGAAGTGGATAACCACATTGCATTATGCATTTCAAGATGATGATTATTTGTATTTTGTCATGGATTACTACAGTGGAGGAGATCTACTCACTCTTCTCAGTAAATATGAAGACCATTTGCCTGAAGAAATGGCTAAATTTTATTTGGCTGAAGTTGCTTTAGCCGTTGATTCTGTACACAAAATGGAATATGTACACAGGGATGTCAAGCCAGACAATGTCCTCCTTGATGTCAGTGGACATATAAGATTAGCCGATTTTGGATCTTGCTCGAAATTTGGCAAAAATGGCACTGTCCGGTCATCCGTTGCAGTTGGTACTCCTGATTATATTTCCCCAGAAATCCTTCAGGCCATGGAGGATGGAAGAGGACAGTACGGTGTAGAATGTGATTGGTGGTCACTGGGTGTTTGTATGTATGAGATGCTTTTCGGTGAAACTCCATTTTATGCTGAATCACTGGTGGAAACTTATAGCAAGATCATGTGCCATACGGGAAAGTTCAATTTTCCATCAGATGTAGAAGTGTCAAACAATGCTAGAGATCTAATGCAGAGACTTTGTTGTAAAATGGAACAGAGGCTAGGCCAAAATGGAATTGATGATTTCAAAAATCACCCCTTCTTTGAAGGAATCGACTGGGATAACATTGGTTACTCTACCCCTCCTTACATCCCTGAAGTCAGTAGTCCTTCAGACACATCAAATTTTGATGTGGATATTGATGAATCAAGAGCAAATGATGCAGTGAGGCCATCTTCTGTGTCTCCTTTCACTGGACATCATTTACCATTCATAGGATTCTCCTTCACTGAAAATAGTCGATTATCAGACAAGGCACATTCTGTTGTCAAGCAGAGTGGAGGAGTTGTTCTGGAACCAGTCCCTAATAATGTGCCCAGTTCTTTGTCTGTTGAAGCGTATGAAAGAAGAATTCAAAGACTTGAAAGGGAGAAGACAGAACTGGTCAGAAAATTAACAGATTCTACAAAAGCATTGCAAGATCAAGTCCTTTCTGTTGATGGACCAACTGGTGATAGAGCAGATTCCATTGAAGTAAAGCGGATGAAGGACGAAATGACTTCAATGAAGAAGAAAATCATGGAATACGAGGCTCAATCCGCGGACATAGAAAAGGAATTACAAGATACCATGGCTTCACGAAAAGAAATGGAATCCAGCAATGAAGAAATGAGTTCTAAGATGAGATCTTTAGACAGAGAACTCCGTGGAGTAAGGATGGAAAAGGAAGACATTGAACGAGTTCTTCAAGAAGCCAACGAAAAAATTGCCACGCAACAAAAGGAACTGAAAGAAGCGCACAGCGCCAGGAAGCTAGCCATGGCTGAGTTCAGTGAATTGAACGACAAGCTGGCAGATATAAGATCGGCTAAAACTAAGGTGTCGAGGATGCTTCGAGAAAAAGAAGAAGAAATGGAATCGACATTACAGAAGCTTGATGCAGTGCGACAGGAAGTGCGCAATGCCGACAGAAAGAAACGAGAGGTTGCCGCTCAAGTTGAAGAATTTACAGCTGAAGCTAACAAGGAAAGGAAACTTCGAGCACGAAGTGATCAGTATGCCAAACAGCTTGAAGAAGAAATTGAATACTTGAAGGCAAAACAAAGAAGTTTGGGAAGACCGTTTGCGACTGACACAACAGCCGAAGAGCAGCAACAGGAAATTACAAGGTTAAAAGCAGAAATTGAAAAACTCAAACTTGAGTTCGAGGAATCTGCCGCGCAGGAACGACAAACTCATTCAAATGAAGTGAAGGAACTAACTGAGAGGATACTAGATGCCGAATCCAACAGAAAGGCATTGAAGAACGAGGTTTCAACATTGACGTCCAAAATCAACGAGGCAAGATTAGACAGCCACCGAGAACACCAAGAAGCTGTTGATGAATTGAAAAGAAAAAGTGAAAGAAATCGGAGTTTGCTGGAGGACGAAAACAAGAAATTACAAGCTGAAGTTGATAAGATGACAGAAACACTTCAGCGCACATCCGCCTCTCACAGAAAACTTGAAGAGGAAATGCGAGATAGCAATGAAAAGAAAGACGCCGTAGCCCAGTGGGAAGGGCAGATTGCTGAAATTATCCAGTGGGTGAGTGACGAGAAGGAGGCCAGAGGCTATCTGCAGGCCCTAGCGAGCAGAATGACAGAGGAACTCGAGGGCCTTAAATCTTCGGGATATGCAACAATACCACGGGGTGAGAAGAATCAGTGGCAGATGAGAAGATCACAGAAAGTTGACAAGCAAGAAATCTTGTCACTACAATCAAAGCTGCAGGCAGAGATTGCAGCCAAACAACAAATGGCAGAAGAAATGAATAAAATCAAAACCGCAAGTGTGTCAATTGAAAGGAAATTAGGAGAATCTGAAGCACAGGGAGATGTACTACGTGAGGAGGTCAAACAACTGAAGGCTGAAATTGAACAATGGAAAGCAGGCAGAAAATCCGGAAATGCATTCCCATTTTTGTTTACGAAAGAATCTTCCACGGATTCGAGAATTTCAGAGCTTTCAGAGGAATCCGAAAGTCCGCTTACTGACGAGAGGTCAGTGGAGAGTGAGGCTCCAACGACATCACCCACCACGGATGGGAACGATACAACGTCCGTCAGATCGTCATCTTTCTCTTCGACGTCATCGATGGTGCCTCCTCAGAGGTCAAGGTATGGACCTTTAGCCATGTTTCAAATCCATACAGACGTCTCTAATTTCTTGAGAGCGGCCTCCAAAACCGTATAA

Transcript

FUN_017883-T1

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5VT25	Serine/threonine-protein kinase MRCK alpha OS=Homo sapiens OX=9606 GN=CDC42BPA PE=1 SV=1
Q9Y5S2	Serine/threonine-protein kinase MRCK beta OS=Homo sapiens OX=9606 GN=CDC42BPB PE=1 SV=2
Q7TT50	Serine/threonine-protein kinase MRCK beta OS=Mus musculus OX=10090 GN=Cdc42bpb PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002051 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00433 all species →	Pkinase_C	Protein kinase C terminal domain	Family	Interproscan
PF00069 all species →	Pkinase	Protein kinase domain	Domain	Interproscan
PF15796 all species →	KELK	KELK-motif containing domain of MRCK Ser/Thr protein kinase	Coiled-coil	Interproscan
PF08826 all species →	DMPK_coil	DMPK coiled coil domain like	Coiled-coil	Interproscan
PF01576 all species →	Myosin_tail_1	Myosin tail	Coiled-coil	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR017892 all species →	Domain	Protein kinase, C-terminal	Interproscan
IPR050839 all species →	Family	Rho-associated Serine/Threonine Kinase	Interproscan
IPR000961 all species →	Domain	AGC-kinase, C-terminal	Interproscan
IPR000719 all species →	Domain	Protein kinase domain	Interproscan
IPR031597 all species →	Domain	KELK-motif containing domain	Interproscan
IPR014930 all species →	Domain	Myotonic dystrophy protein kinase, coiled coil	Interproscan
IPR008271 all species →	Active_site	Serine/threonine-protein kinase, active site	Interproscan
IPR017441 all species →	Binding_site	Protein kinase, ATP binding site	Interproscan
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR002928 all species →	Domain	Myosin tail	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22988 all species →	MYOTONIC DYSTROPHY S/T KINASE-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004674 all species →	Molecular Function	protein serine/threonine kinase activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0005856 all species →	Cellular Component	cytoskeleton	Interproscan
GO:0018107 all species →	Biological Process	peptidyl-threonine phosphorylation	Interproscan
GO:0031032 all species →	Biological Process	actomyosin structure organization	Interproscan
GO:0004672 all species →	Molecular Function	protein kinase activity	Interproscan
GO:0016459 all species →	Cellular Component	myosin complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for FUN_017883-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.