Genomic Location: contig_30:1238410...1244831
NR annotation: XP_020603220.1, macrophage receptor MARCO-like isoform X1 [Orbicella faveolata]
| CDS |
| FUN_017891-T1 |
| Transcript |
| FUN_017891-T1 |
| Protein |
| FUN_017891-T1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01391 | Collagen | Collagen triple helix repeat (20 copies) | Repeat | Interproscan |
| PF00229 | TNF | TNF(Tumour Necrosis Factor) family | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR008983 | Homologous_superfamily | Tumour necrosis factor-like domain superfamily | Interproscan |
| IPR008160 | Repeat | Collagen triple helix repeat | Interproscan |
| IPR006052 | Domain | Tumour necrosis factor domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11471 | TUMOR NECROSIS FACTOR FAMILY MEMBER | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0005164 | Molecular Function | tumor necrosis factor receptor binding | Interproscan |
| GO:0006955 | Biological Process | immune response | Interproscan |
| GO:0016020 | Cellular Component | membrane | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K24213 | C1QTNF9; complement C1q and tumor necrosis factor-related protein 9 | - | Domain-containing proteins not elsewhere classified | ko04990 | deepkoala |
