Detailed information of FUN_018368-T2 in Colpophyllia natans

Genomic Location: contig_31:1572012...1597415
NR annotation: CAH3110250.1, unnamed protein product [Pocillopora meandrina]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9JLI8Spliceosome associated factor 3, U4/U6 recycling protein OS=Mus musculus OX=10090 GN=Sart3 PE=1 SV=1
Q15020Spliceosome associated factor 3, U4/U6 recycling protein OS=Homo sapiens OX=9606 GN=SART3 PE=1 SV=1
Q5REG1Spliceosome associated factor 3, U4/U6 recycling protein OS=Pongo abelii OX=9601 GN=SART3 PE=2 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00076RRM_1RNA recognition motifDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000504DomainRNA recognition motif domainInterproscan
IPR034217DomainSART3, RNA recognition motif 1Interproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR003107RepeatHAT (Half-A-TPR) repeatInterproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR17204PRE-MRNA PROCESSING PROTEIN PRP39-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0006396Biological ProcessRNA processingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K22611SART3, TIP110; squamous cell carcinoma antigen recognized by T-cells 3-Chromosome and associated proteinsko03036deepkoala

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