Gene detail

Detailed information of FUN_018440-T2 in Dendrogyra cylindrus

Genomic Location: contig_32:4582298...4623207
NR annotation: XP_020617476.1, adhesion G protein-coupled receptor L1-like [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

FUN_018440-T2

GGACTGTAAAGCACTGATCTCTTGGCAACAACATGAACCTTTAAGAACGTTTACTGGGATCTTGTTTTCTTCGTggaaactttgaaaagccaCGGATTAAGGTCACTTTTACAAATGACAGGAGAAATAATATGAAAGATAGAAACGAAAAGGAAACCATCAGTCCTGATGAGGAAGTTGTTGCTGATTGGATAAATCAACTGAAATAAGTTCATTAACACATGGTGATATTCGCACTGGAAACAGCGGTCTGCAATGTGGGCACTGTACGGGCTTACTCTCGTCTCGTATTTAGCCGGCTGCATAGAGGCATATCAGTACCACATACATGACAATAAAATTAAATGGACGCAAGCTGTTGAAAATTGCCAACGGAATGGCTCAATTTTGGCCGTGCTCGATACTCAGGACATAATCGACGAGTTGGCGGGAAAACTTTCGTCGCTAGGTTACTCCGATGCAGACAAGTTCTGGATTGGCCTTGTGTTCAACGCATCCAGTCAGCAGTTTGAATGGAGTTCTGGAGTCGCTGCAAGCGAATCCGTCAAAAACTCTACCTGTGGAGTGAACCCGGGTGACTACATTGCTCCTAGAAGAAACTGGTGTTATGTGCTTAAGCGCGTTAACTCCAATTCACCATGTTTTGGTATACGGACTTGCGACTGGGGACATGCTAATGGATACATTTGTCAGACTTACAATGCTGAAGTCCAGACACCAACTCCTTCCGCACTGGCGACGCATCTTACTACTAACATCGAAGCCGCCACTACGACTCCAAGTAACGCAGGCTCAACAGTCTCCGAAAATGGACCAAACTTGAAGACTTCTAAATTCATAACATCCAGTATGAATGCGGACATTGGGGTTTCTTCCTCTAGCACCCCTTTAACAAGTGCACTGGTAACGCATGCGCATATTAATACTCTTGCTGATAAGATCAATGCCGCCACTGTGACTCCAGGTAACGCCGACTCAACAGTCTCCGAAAATGGACGAAATTTGAAGACTTCCAAATTCGTAACATCCAGTATGAATGCGGCAACTACGATTTCTCCTTCAACAAGTGAAGTATCAAGGGTCCTCGAAGATGAGCCATACACTAACGACAAAGTGGAATCTAAGAATCCATTGTTAGAGTTTTCGGCCTTGATGAATTCTCTAAATCCAAAGGACCCGCTGTCTTTAAAGGTCGCCGCAGATGCATTTGAGACTTTGGCGACTTCCGTTCAAGCCGAGAAGAAATCTGGGACTGGCATCAATGTAATAGAATCTACCCAATGGATCGAAGAGTTTGCATTCAAGTACGCCGCCTTTAATTTAAATGCATCAAACGCTGAGGAGAGAAGAGAAAACAAACATATCGTCTTGCAAGTCTCGTTGGTGCCAAAAGGTTACTCTCGAAATTTTACATTTACGGAAGAGGACGACATTCAGGAAGTAGCGAGAGttactttaccttcgtttttgtTTCATAAACAGGACACTTTTGTAGTAAACACATTGTACCGGGATCTCCACGAATTTGTTGACAACTCTGACTCTAGGAAAAGCAAAATTGATTCCATGATCCTGGGAAGTGATGTTAGACCATCTGAACAAGAAACTTTTACGGAGAATGTGACAATCGTTCTCCGAACGTTTGAGGAGAATGAAAATACAAGAAGGAAAAGCTGTGTATTCTGGAAATGGAACTTCTCACACACAGCAAATGGAAGGTGGTCTGGCGATGGCTGTTCATTGGCGGAGTCTAACAGAAGTCACGTGGTCTGCACGTGCAATCATTTGACAAATTTCGCCATTTTAATGAACGTCAAACATCATAAGCTCCCAGATGAACACAGACAAGCATTATGTTACTTTACTTTCACTGGACTGGGGATTTCACTACTTGGAGAGACTATTACTATCATTGCATACCTGTTATTACTatgtTCGAGTAATGACCAGCAAAGCCATGTCCATATGAACTTGGTTGCCACATTAGCTATGGCACAGATGATCTTCCTGGCGGGAATTAACGCTACTCACGATCAGGTGATTAGGGTCCGCTGTAACTTGACCTGAAAATTCTTCCGCTATAACTTAACATGACCGtaacagttttttttctgtgtcGTTGTCTGCGTCGTTTCCTGTGtggcatcttcctgcagacaatttttttttaatgtctgCAAATAATCTATTTGTGctcttttgcttttgcaaacaattttcttttaggatttttcattcctcccccctccctcctcctCCTTCAAAAAATAATGCATCCCATAGTAGCATGCGCATCCTCTGAAAATCACATTGATGGCGGACTCTTTATCGGCAAATAGAGAATTAGAACTCAATTACTTAGTtagccagtcagtcagccacTCAATCAGGTAGTCACTCATCTATTCATTcctttagtcagtcagtcagtcagtc

Protein

Uniprot

Uniprot term	Description
Q9QYP2	Cadherin EGF LAG seven-pass G-type receptor 2 (Fragment) OS=Rattus norvegicus OX=10116 GN=Celsr2 PE=1 SV=1
Q9R0M0	Cadherin EGF LAG seven-pass G-type receptor 2 OS=Mus musculus OX=10090 GN=Celsr2 PE=1 SV=3
Q9HCU4	Cadherin EGF LAG seven-pass G-type receptor 2 OS=Homo sapiens OX=9606 GN=CELSR2 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00059	Lectin_C	Lectin C-type domain	Domain	Interproscan
PF01825	GPS	GPCR proteolysis site, GPS, motif	Motif	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR016187	Homologous_superfamily	C-type lectin fold	Interproscan
IPR016186	Homologous_superfamily	C-type lectin-like/link domain superfamily	Interproscan
IPR046338	Homologous_superfamily	GAIN domain superfamily	Interproscan
IPR000203	Conserved_site	GPS motif	Interproscan
IPR001304	Domain	C-type lectin-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12011	ADHESION G-PROTEIN COUPLED RECEPTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004930	Molecular Function	G protein-coupled receptor activity	Interproscan
GO:0005887	Cellular Component	plasma membrane	Interproscan
GO:0007189	Biological Process	adenylate cyclase-activating G protein-coupled receptor signaling pathway	Interproscan