Detailed information of FUN_018552-T2 in Acropora pulchra

Genomic Location: ptg000012l:10738170...10832864
NR annotation: XP_044183713.1, LOW QUALITY PROTEIN: nesprin-1-like [Acropora millepora]
Species abbreviation APULC · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q03001Dystonin OS=Homo sapiens OX=9606 GN=DST PE=1 SV=4
M9MRD1Muscle-specific protein 300 kDa OS=Drosophila melanogaster OX=7227 GN=Msp300 PE=1 SV=1
Q8NF91Nesprin-1 OS=Homo sapiens OX=9606 GN=SYNE1 PE=1 SV=4
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001814 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00435
all species →		SpectrinSpectrin repeatDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR018159
all species →		RepeatSpectrin/alpha-actininInterproscan
IPR002017
all species →		RepeatSpectrin repeatInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11915
all species →		SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0003786
all species →		Molecular Functionactin lateral bindingInterproscan
GO:0005826
all species →		Cellular Componentactomyosin contractile ringInterproscan
GO:0030036
all species →		Biological Processactin cytoskeleton organizationInterproscan
GO:0030054
all species →		Cellular Componentcell junctionInterproscan
GO:0030864
all species →		Cellular Componentcortical actin cytoskeletonInterproscan
GO:0032432
all species →		Cellular Componentactin filament bundleInterproscan
GO:0042995
all species →		Cellular Componentcell projectionInterproscan
GO:0051015
all species →		Molecular Functionactin filament bindingInterproscan
GO:0051017
all species →		Biological Processactin filament bundle assemblyInterproscan
GO:1903478
all species →		Biological Processobsolete actin filament bundle convergence involved in mitotic contractile ring assemblyInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K19326SYNE1; nesprin-1-Chromosome and associated proteinsko03036deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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