Gene detail

Detailed information of FUN_018577-T1 in Dendrogyra cylindrus

Genomic Location: contig_33:1688312...1712818
NR annotation: XP_022788239.1, receptor-type guanylate cyclase gcy-8-like [Stylophora pistillata]
Species Dendrogyra cylindrus · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

FUN_018577-T1

ATGATTGCCTGGATTTTTCTGTCCGTGCTTGCCACAACAGAAGTTTCCAGGGCGGCTGGAAAGTGTCTGAAAACCGATTTTATTGGGCAGACTGCAAAACGACATTTCAAGCTGTACGGTGATCCTATCTCGTTACTACCATTAAAATTGAGCTATAGTAGACGAGCATCTCATCAGATTTCCACTCATGTGCTGCATATATTGTTAGAGGAAGTGTTAGGATATGAAGATGTTGTTCTGGTCCCAGATGAGTCTAGTTTGTCAATCAACAGTGCTCTCCAAAAGTTAACAGGATGTGAAAATCACAGCTGTCAGTCCAGTGTTGTTCCAGATGTTATGATCAACACAGAAGTCTGGGTACCACCTGGTTATCAATATGACAAGTGGGTAGACAGTCAGTTGGTAGATGAAGCTGGGACCATCACTACCCATGGAAGGTTTGGATGGTATCTACCAACTTCTTTTGTTGAAAGCTCATGGAATGATAGCAGAATCATAGCAGATAGCTGGAGAGCATTAGAGCTGGAGACAGTTATAGGACAGTTGTTACACAATGCATCTCTGATCAATTCTTATATAAATATATCAGAATATGAGAAATCTTGTGAGGATGTAACTGGCTGTAATGATGGCTGGCTTCATGGTGTAAAGTGTAAAGGTGGTGATAATGCACTGAATTGCGCAGTTCTTTTGGCTGATTTTCCAGATCACTATGGATCGGTGGTCAGACAACAGATCAATAGCCTTGGTTTAAATATATCAGTAGCATGGTTAGGCTCCGAGTTAGAACATGCCATCAGTAGAGTGGAGGGTCAGCCATTCCTGCTGTTAAACTGGGAACCCAATGCTGTATCAAGGACAAAGAAGATGACAAGAATAAGCTTTCCTTCATGCAGTGCTGGTGTGTCCTTTGTTAAAGCTATGACATCTCGGCAGGATTACTACAACTGTGATTTTCCCCCAAGCCATCTGCGTAAATTTTCTTGGCGAAAAATTCAGGATAATGCCCCTGATGTGTATAACTTATTGTCAAAAATACACTTTGACAAAGACACGCTTGATAACCTCTTGCACAAACATAAGAATGGCAGAGGAAATTTAACAAGCCAAGAAGCTGCTTGTGATTGGGTACGGCAGACTAGAGATGTCTGGATGACATGGCTACCTCCTGGCAGTCTAAACAAGGTGCCAGTTTATCTTGGAGGGATGTTCCCGTTATCAGTCAGCGACGATGCAGTGTGGAGCAGGCCTGGAATTCTACAGGGAGCATTGATGGCATTAGAGAAAATCAATCAAGATTACAAGATTCTCAGTAATTACAGTTTGGACATCATCATAGAAGACACACAGTGCAAAACAGCTCTCATTCTCAATGCATTCATAGAGTTTATGTCACAGGAGCACAATAAATCAATAGTCGGCATCTTAGGCCCAGCCTGTTCAGTTCAAACTGAGATTATTGCTGAAGTCGCACCTTTGTACAATACCATTGTCATGGGTTACAGTGTGGAAGGTGTTGCACTGGCAGATCGTGACAAGTACCCGCTGTTCTTCCGCACCTCTCCAAGCTATGCTGAATTTAAATATGCCTATGCCACAGTATTTGAGTTCTTTCAATGGAAGCAGTATGCTTCACTGACTGATACAAACTACGTGTCACAGACTGTGACGGCTACTCATGAGTATTTGGAGAGCAGAGGAATTAGCCTGGTATATGCTAGGCAGATTGCAAATCAAGACAGTGTAGACATTAAGACTTATGTAACGTCCTTACAAGAGAGCTTGGCAAAGATTATCATTGCGACTTTGTTTGAGGGTCTGGCAAAAGCTGTTGTGTGTGAAGCCTACAGGCAGGGCTTGACTCCACAGAATGGCTATGTTTGGTTTCTACCTTCATGGCTAGCAGACAGCTGGTGGCATGTGGATCACGTGCATGGCGACAGCACTGACGGGATGCTGGATGTACCTTGCTCCAGTGCCGACATGAAAGAGTTTGTCAGTGGCGGTTATTTCTCACTTTCCAATGCCTTCTATGGCACGGATTGGACCACAATACTTAGTGGAGGTACTGTGGCTCAGTGGAGACAAGAATATGAAAGGAGGGTCAAGAAAGAGGGTCATGCTCCATCAGGATATGCAAGTTTTGCCCATGATGCTGTGTGGGCCTATGCTCTGGCATTGGACAAACTCTTCAAGTCATATCCTGCAGGACTGGATACAATAAGAATCAATCACACGACACAGCTTTTGAAAAGCTATCTCCAGCACACCAACTTCAGTGGCGTGTCAGGCCGGGTGATTTTCAGAGATGGGGAGCGCTACCTTCCCACTGTTGAGATGGCGCAGCGCTTCTCCAGCAGGGAAGTGATGGTGGGGCGTGTGCTTCCAAACATGTATGGACTCTGTGGTAAAAGCAGAGGTTGTTTAGAAATGAACGAAACCAGTATTCACTGGCCAGGAGGGAGCAGACCAACTGATGGTAGATCACATCCGTTTGCCCATCAAGTGTGTTCTGTGGAGTCATTCAGAGCGGCTCTTGGTATCTCATGCAGTGGAGCAATTGCTGTGATAAATGCAATAGCTATTGGGTTGTTCCTCGTCGTTGTTATAACGCTCATATGGATCTGCATCAAGCGGAGATACGATCGAAAGTACAAGGAAACACAACAACGGATGGAGGAGTTAGGTTTGATGGAACAATCTTCACTGCTTCACCTGGACGAGTGGGAAATCCCGCGGGAGAATATTGTCCTGAATCGCAAGCTTGGTGAAGGAGCGTTTGGTGCTGTGTGTGGCGGAGAGGTGATCGGACTCAGGCGCGAGGGAGAATGGGTACCAGTGGCGGTTAAATCTCTCAAGATTGGTTCTTTACCCGAGGATAAGctTGAATTTCTCAGCGAGGCAGAAACAATGAAGATCTTTGATCACAAGAACATCGTAAAACTGTTGGGTGTTTGTACAAAGGGAGAACCCGCCTTTGCAGTAATGGAGCTTATGATACACGGTGACCTGAAGAACTTCTTGTTAGCCAGACGTCCATTTGCAAATCAGGACTGCAAAGAGGCCGAAGATGTTACTCCAAGCAAGTTGACCGCGATGGCCTTGGATATCACTAGTGGACTAGCTTACCTTGCTGACATAAAGTTTGTTCACCGGGATCTCGCATTGAGAAACTGCATGGTTGGATCAGGATATGTGGTTAAACTGGGAGACTTTGGCATGGCGCGGGCTATGTACGACTCAGATTACTATAGGTTTGGACGAAAAGGCATGCTTCCTGTTCGCTGGATGTCGCCCGAGTCCCTGGCAGATGGTGTATTCACGACCAAGTCTGACGTATGGAGCCTGGGTGTGATATTGTGGGAGGTGGCTACGTTTGGTAGTTTTCCTTACCAGGGCCTCTCGAACAGCGAAGTGGTGGAGAGAGTCAAACTCGGGCGAATCATGGACAAACCTCAAGGATGTACAAGTGAACTGGAAACCTTGCTGACCGAATGCTGGAGAAAAGACCCAGTCCACAGACCAGACCCTGGTAAAATCTGCGAGTTGCTGAACACACACCCAGCGATGGTAACCGCGTGCTTAGATTCGCCCATGTCCAGCGTGGCTACAGATGAGGACTGCATACAACCACGTGACATAAGAAGGGACAGCGTGCGGACGTGGCGTGGCACCCCGTCGCCATCCCTGAGGCGCTCTCGCACGATAACTCATCTCACGCAAGATCAGATTAAAATTTTGATGCCGCATCGCGAAAACGGCGTGACTTCCGCTGGCGCTGTGTAA

Transcript

FUN_018577-T1

GTCCAAAACAATATCAGATTCCTCATGGCCAGTGCTTTGCACAGCTGCTGAAAACAAGGATGGTTTGAAGTGAAAAGATTAGATTTCACAGCTATGGACGAAGCAAGATGATTGCCTGGATTTTTCTGTCCGTGCTTGCCACAACAGAAGTTTCCAGGGCGGCTGGAAAGTGTCTGAAAACCGATTTTATTGGGCAGACTGCAAAACGACATTTCAAGCTGTACGGTGATCCTATCTCGTTACTACCATTAAAATTGAGCTATAGTAGACGAGCATCTCATCAGATTTCCACTCATGTGCTGCATATATTGTTAGAGGAAGTGTTAGGATATGAAGATGTTGTTCTGGTCCCAGATGAGTCTAGTTTGTCAATCAACAGTGCTCTCCAAAAGTTAACAGGATGTGAAAATCACAGCTGTCAGTCCAGTGTTGTTCCAGATGTTATGATCAACACAGAAGTCTGGGTACCACCTGGTTATCAATATGACAAGTGGGTAGACAGTCAGTTGGTAGATGAAGCTGGGACCATCACTACCCATGGAAGGTTTGGATGGTATCTACCAACTTCTTTTGTTGAAAGCTCATGGAATGATAGCAGAATCATAGCAGATAGCTGGAGAGCATTAGAGCTGGAGACAGTTATAGGACAGTTGTTACACAATGCATCTCTGATCAATTCTTATATAAATATATCAGAATATGAGAAATCTTGTGAGGATGTAACTGGCTGTAATGATGGCTGGCTTCATGGTGTAAAGTGTAAAGGTGGTGATAATGCACTGAATTGCGCAGTTCTTTTGGCTGATTTTCCAGATCACTATGGATCGGTGGTCAGACAACAGATCAATAGCCTTGGTTTAAATATATCAGTAGCATGGTTAGGCTCCGAGTTAGAACATGCCATCAGTAGAGTGGAGGGTCAGCCATTCCTGCTGTTAAACTGGGAACCCAATGCTGTATCAAGGACAAAGAAGATGACAAGAATAAGCTTTCCTTCATGCAGTGCTGGTGTGTCCTTTGTTAAAGCTATGACATCTCGGCAGGATTACTACAACTGTGATTTTCCCCCAAGCCATCTGCGTAAATTTTCTTGGCGAAAAATTCAGGATAATGCCCCTGATGTGTATAACTTATTGTCAAAAATACACTTTGACAAAGACACGCTTGATAACCTCTTGCACAAACATAAGAATGGCAGAGGAAATTTAACAAGCCAAGAAGCTGCTTGTGATTGGGTACGGCAGACTAGAGATGTCTGGATGACATGGCTACCTCCTGGCAGTCTAAACAAGGTGCCAGTTTATCTTGGAGGGATGTTCCCGTTATCAGTCAGCGACGATGCAGTGTGGAGCAGGCCTGGAATTCTACAGGGAGCATTGATGGCATTAGAGAAAATCAATCAAGATTACAAGATTCTCAGTAATTACAGTTTGGACATCATCATAGAAGACACACAGTGCAAAACAGCTCTCATTCTCAATGCATTCATAGAGTTTATGTCACAGGAGCACAATAAATCAATAGTCGGCATCTTAGGCCCAGCCTGTTCAGTTCAAACTGAGATTATTGCTGAAGTCGCACCTTTGTACAATACCATTGTCATGGGTTACAGTGTGGAAGGTGTTGCACTGGCAGATCGTGACAAGTACCCGCTGTTCTTCCGCACCTCTCCAAGCTATGCTGAATTTAAATATGCCTATGCCACAGTATTTGAGTTCTTTCAATGGAAGCAGTATGCTTCACTGACTGATACAAACTACGTGTCACAGACTGTGACGGCTACTCATGAGTATTTGGAGAGCAGAGGAATTAGCCTGGTATATGCTAGGCAGATTGCAAATCAAGACAGTGTAGACATTAAGACTTATGTAACGTCCTTACAAGAGAGCTTGGCAAAGATTATCATTGCGACTTTGTTTGAGGGTCTGGCAAAAGCTGTTGTGTGTGAAGCCTACAGGCAGGGCTTGACTCCACAGAATGGCTATGTTTGGTTTCTACCTTCATGGCTAGCAGACAGCTGGTGGCATGTGGATCACGTGCATGGCGACAGCACTGACGGGATGCTGGATGTACCTTGCTCCAGTGCCGACATGAAAGAGTTTGTCAGTGGCGGTTATTTCTCACTTTCCAATGCCTTCTATGGCACGGATTGGACCACAATACTTAGTGGAGGTACTGTGGCTCAGTGGAGACAAGAATATGAAAGGAGGGTCAAGAAAGAGGGTCATGCTCCATCAGGATATGCAAGTTTTGCCCATGATGCTGTGTGGGCCTATGCTCTGGCATTGGACAAACTCTTCAAGTCATATCCTGCAGGACTGGATACAATAAGAATCAATCACACGACACAGCTTTTGAAAAGCTATCTCCAGCACACCAACTTCAGTGGCGTGTCAGGCCGGGTGATTTTCAGAGATGGGGAGCGCTACCTTCCCACTGTTGAGATGGCGCAGCGCTTCTCCAGCAGGGAAGTGATGGTGGGGCGTGTGCTTCCAAACATGTATGGACTCTGTGGTAAAAGCAGAGGTTGTTTAGAAATGAACGAAACCAGTATTCACTGGCCAGGAGGGAGCAGACCAACTGATGGTAGATCACATCCGTTTGCCCATCAAGTGTGTTCTGTGGAGTCATTCAGAGCGGCTCTTGGTATCTCATGCAGTGGAGCAATTGCTGTGATAAATGCAATAGCTATTGGGTTGTTCCTCGTCGTTGTTATAACGCTCATATGGATCTGCATCAAGCGGAGATACGATCGAAAGTACAAGGAAACACAACAACGGATGGAGGAGTTAGGTTTGATGGAACAATCTTCACTGCTTCACCTGGACGAGTGGGAAATCCCGCGGGAGAATATTGTCCTGAATCGCAAGCTTGGTGAAGGAGCGTTTGGTGCTGTGTGTGGCGGAGAGGTGATCGGACTCAGGCGCGAGGGAGAATGGGTACCAGTGGCGGTTAAATCTCTCAAGATTGGTTCTTTACCCGAGGATAAGctTGAATTTCTCAGCGAGGCAGAAACAATGAAGATCTTTGATCACAAGAACATCGTAAAACTGTTGGGTGTTTGTACAAAGGGAGAACCCGCCTTTGCAGTAATGGAGCTTATGATACACGGTGACCTGAAGAACTTCTTGTTAGCCAGACGTCCATTTGCAAATCAGGACTGCAAAGAGGCCGAAGATGTTACTCCAAGCAAGTTGACCGCGATGGCCTTGGATATCACTAGTGGACTAGCTTACCTTGCTGACATAAAGTTTGTTCACCGGGATCTCGCATTGAGAAACTGCATGGTTGGATCAGGATATGTGGTTAAACTGGGAGACTTTGGCATGGCGCGGGCTATGTACGACTCAGATTACTATAGGTTTGGACGAAAAGGCATGCTTCCTGTTCGCTGGATGTCGCCCGAGTCCCTGGCAGATGGTGTATTCACGACCAAGTCTGACGTATGGAGCCTGGGTGTGATATTGTGGGAGGTGGCTACGTTTGGTAGTTTTCCTTACCAGGGCCTCTCGAACAGCGAAGTGGTGGAGAGAGTCAAACTCGGGCGAATCATGGACAAACCTCAAGGATGTACAAGTGAACTGGAAACCTTGCTGACCGAATGCTGGAGAAAAGACCCAGTCCACAGACCAGACCCTGGTAAAATCTGCGAGTTGCTGAACACACACCCAGCGATGGTAACCGCGTGCTTAGATTCGCCCATGTCCAGCGTGGCTACAGATGAGGACTGCATACAACCACGTGACATAAGAAGGGACAGCGTGCGGACGTGGCGTGGCACCCCGTCGCCATCCCTGAGGCGCTCTCGCACGATAACTCATCTCACGCAAGATCAGATTAAAATTTTGATGCCGCATCGCGAAAACGGCGTGACTTCCGCTGGCGCTGTGTAAGAGCCACCGAAGAGTTCACGCTATTATTTCAGTTAAAACCGCGCGCCTTATGTAGGGTATGAAATGAATATAGCGGCGCGCGACCAAGCTGTTGAACGGCTTGTGGCTGTCAGGAGTTCCTGTGCGCTCAGTTGTTAACACAAAAGGCTTCTTTCTACGCGCCTATCTAACGAGGAGCCCTTTAATAAGGTCTTCTACACGCCACTCTATAGGGAGAGGCCCTAAGCATGTGCTCCTCTTAACAACAATGCAACCTTAAAGAGGGCCTTGATGGTTTCTTAAGAGCCGTatcatttttaactttttatcaTCCCCCTTTCTTTATCATTTTAAACCCTCAATGCAGGACTACGCACAACAGACTAATTTTCGCGCTGTGGTTCATTTTTATGAAGTtaatattttaatcttttttagagctttcagcttttaaaaatttaaagacgatctctggctaaaaatatttaaaaagtacaa

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q05688	Insulin-like growth factor 1 receptor (Fragment) OS=Bos taurus OX=9913 GN=IGF1R PE=2 SV=1
Q25410	Putative molluscan insulin-related peptide(s) receptor OS=Lymnaea stagnalis OX=6523 PE=2 SV=1
Q60751	Insulin-like growth factor 1 receptor OS=Mus musculus OX=10090 GN=Igf1r PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002974 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04069 all species →	OpuAC	Substrate binding domain of ABC-type glycine betaine transport system	Family	Interproscan
PF01094 all species →	ANF_receptor	Receptor family ligand binding region	Family	Interproscan
PF07714 all species →	PK_Tyr_Ser-Thr	Protein tyrosine and serine/threonine kinase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR007210 all species →	Domain	ABC-type glycine betaine transport system, substrate-binding domain	Interproscan
IPR001828 all species →	Domain	Receptor, ligand binding region	Interproscan
IPR001245 all species →	Domain	Serine-threonine/tyrosine-protein kinase, catalytic domain	Interproscan
IPR050122 all species →	Family	Receptor Tyrosine Kinase	Interproscan
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR020635 all species →	Domain	Tyrosine-protein kinase, catalytic domain	Interproscan
IPR000719 all species →	Domain	Protein kinase domain	Interproscan
IPR028082 all species →	Homologous_superfamily	Periplasmic binding protein-like I	Interproscan
IPR008266 all species →	Active_site	Tyrosine-protein kinase, active site	Interproscan
IPR017441 all species →	Binding_site	Protein kinase, ATP binding site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24416 all species →	TYROSINE-PROTEIN KINASE RECEPTOR	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0022857 all species →	Molecular Function	transmembrane transporter activity	Interproscan
GO:0043190 all species →	Cellular Component	ATP-binding cassette (ABC) transporter complex	Interproscan
GO:0055085 all species →	Biological Process	transmembrane transport	Interproscan
GO:0004672 all species →	Molecular Function	protein kinase activity	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan
GO:0004714 all species →	Molecular Function	transmembrane receptor protein tyrosine kinase activity	Interproscan
GO:0005887 all species →	Cellular Component	plasma membrane	Interproscan
GO:0007169 all species →	Biological Process	cell surface receptor protein tyrosine kinase signaling pathway	Interproscan
GO:0007275 all species →	Biological Process	multicellular organism development	Interproscan
GO:0033674 all species →	Biological Process	positive regulation of kinase activity	Interproscan
GO:0043235 all species →	Cellular Component	receptor complex	Interproscan
GO:0004713 all species →	Molecular Function	protein tyrosine kinase activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for FUN_018577-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.