Gene detail

Detailed information of FUN_018594-T1 in Dendrogyra cylindrus

Genomic Location: contig_33:1900985...1912142
NR annotation: XP_020628145.1, heat shock factor protein 1-like isoform X2 [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

FUN_018594-T1

AGCCTGCGCGCGGGGAGACGGAAAAATATGGCCGATTTGTGAACCGCTTGGGTAACTTACGCACCTATTTTCCTCCACGCATACCGGCGAGAAAGCTATTTTGTTTAGGggtgattttgaaaagaatgccGATGAAGACGGGAGACGGAGATTCGAGCGGAATTCCATCTAACGTCCCAGCTTTTTTGGTGAAACTGTGGAAGCTGGTCGAAGATCCACAATACGAAGAACACATTTCATGGAACAAGAATGGAACCGGATTCTTGGTTCACGACCAAGCTACGTTTGCACGCGAAATTCTTCCCAAGTATTTCAAACATAACAACTTTGCAAGCTTCGTTCGTCAGCTAAATATGTATGGCTTTCGCAAGGTGATTGGTGCTGAACAGGGAGGTCTGCGGTCGGAGAAAGATGAGTGGGAATTTTTTAATGGAAATTTCAACAAGTATCATCCTGAATTGCTGGAGAATGTCAAGAGAAAGGCTACACCAGAAGAAAAGAAGATGAAAAATGAAGATGTGTCTAAAGTGTTAAATGATGTACAAGACATGAAGGGAAGGCAGGATGAGATGACCATAAAGCTTGAGCAGATTAAGAGGGAAAATGTAACCTTGTGGAATGAACTGGTAGAGCTGCGGCAAAAACATCAAAGGCAACAGCAGATTGTGAACAAGCTGTTCCAGTATCTAATGCGCTTGATTTATCAAAATGATAAGCTTATGAACAGAAAACGATTGATGCTTCAAGACAGTACAGAGGAGGAATCTTCTTCTTCCAAGCATGGACGCTATGAATACAGGGATGGGTCCGGTCCCAGCAGTGGGCAGCCTCCTCCAAGCTACACTGCTCAGAGACCAAGCACACAGACCCTGACAATCTCTGATATATCAAATGCTCCTTCCTCAAGCATTCCTTCCACAAGTGGGCCTCTAATAACTGCTTTACCAGATGACGACACACTCTCACATGCCAGACCAGTCATAAGATTTCCAGAGGACTCAGTTCCATCGTCACAGCCCACTGTGTCCAGCCCTGTGTCGACATCAGCAGCTCCATCTTACCCACAAGCCTCAGTGTTACATGCACAGCCATCAACAGGCGTGGTCACTTTCCCTGAGGAGCAGACCCCGACATCTGTTGTGCATCCGACACACATCATGGAGCCTCAACAGAATTATATTGGTGATCAAGTGGAATACATTTCACAGAACCTTGATACCATTCAGTATCAACTGGCAAATCACCCCGTGATGTTGGATAATAGCTTACTCTATGATGTATTTGGCCATGAGATTTCCCCAGGCCAGGATCCACTTGATCTTTTAGCCGACCGGGCTGCAGCAAGCCCTCTTCCTGGCGTTGGGCATGCTTCATCTCAAGCAGGTCATGAGCTCGTGCAGTATGGAATGCAGGGGTCTGGTGCTAACAGCAGCTCTCCCCGAGGACACCCGAGGTCCAGAGAACGCGAAGACCAATACGGGCGAAGAGAGTGGGCCCAAGGGCAACAGCAACAGCCTGAATATGACGTTGTGCAACACCTGTTTAATGGTTGAGGCACTGAGAATGAAAGTCTTAAGTTCTCAATCTTTTAGTTCTTAACTTGCTTTTGGTGGTGGTTTCTCGTTGTTTTTAGACGTTTTTAAAATGCTGTAGGTATAATTTTATTTCATCGGTAAAAGCGACAGTTCCCTCTCATTTTAGTCGCTATTTCTTATTTCGAATTTAGCAAATCAGAACAAAGCCGAACAGTTTTCAGTTAACTTTCACATGGCGGATGAAAGTTTTATAAACGACTAAGAACTAAAACAGTGATCAGTAaaaaagcgcgggaaatgtGGCGGAGAGCCGGCAGCAGAAAGTggaataaaccaatcaaagccTGAATTAGGAAAACGGCAGTCGGtgtaaagcgcgggaaaagacGCGTCGAGGCAGTGAATGATTGGTTTGAATTTTACACGTGATTGGCTGAGAGAGCAGCATTTTTGCTCTGATTGGTCAGGGCATTTTTCATTGTTGACCAATCGCTGAGCTCAGTTAACGCAAAAACAGCAAACACAATTTGTTCTCGACGTGTCCGGAGAAGCGCAGTGTCGCTTATCGCACtaaatatttttaaagcattgtaTGATATGGTATGAGAATCACGAGCGTAATTTAGCTGTATTTGCGCCGAATTAAAATAACATGAGACGATAACGTATAATAAGCTTAAATGTATTAACGAAGCTTCAATGAGATTTAAGTGTATGtatttgtatattatgtttttaAGTACGATATAATGACATTTTAGGACCTTGCAGAATGCAGTAAGCTCATTATATTCAAGAGGCTAATTAGGTTTTCAATGATTTAAGGGATTGAAGTTGTACTTGTTAGAACGTAGAGAACgtattaaaaagaaagaaacgaaaaaatataaaaataaataaagaaactaAGTAAAAGAATGATAGCGTTGGTTTTGTTTTCCTGGTTACTGCACTGCTGCCTCGTTTCCAGGCGTTCTTCCTAGGTTGGCCTGCATTTCGCGTGGAGTTGCATTGTGGGACTGTTTAGCCCCGCGTCCCTGTTTCCCGCCTTTCACCTAGAAATTACAACGGCGCCTGGGGACGAAGCAGCCTGCCCCGCAGTTGAAAATCGGGGGCAAACACGCACAAAAGCCGAAATTATCCACTATGCGCTACCTCACATTCCCAGGG

Protein

Uniprot

Gene family

Uniprot term	Description
P38529	Heat shock factor protein 1 OS=Gallus gallus OX=9031 GN=HSF1 PE=1 SV=1
Q08DJ8	Heat shock factor protein 1 OS=Bos taurus OX=9913 GN=HSF1 PE=2 SV=1
Q00613	Heat shock factor protein 1 OS=Homo sapiens OX=9606 GN=HSF1 PE=1 SV=1

Gene family	Subfamily
Transcription Factors Family	HSF

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00447	HSF_DNA-bind	HSF-type DNA-binding	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036390	Homologous_superfamily	Winged helix DNA-binding domain superfamily	Interproscan
IPR000232	Domain	Heat shock factor (HSF)-type, DNA-binding	Interproscan
IPR036388	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan
IPR027725	Family	Heat shock transcription factor family	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10015	HEAT SHOCK TRANSCRIPTION FACTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003700	Molecular Function	DNA-binding transcription factor activity	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0043565	Molecular Function	sequence-specific DNA binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K09414	HSF1; heat shock transcription factor 1	-	Transcription factors	ko03000	deepkoala