Gene detail

Detailed information of FUN_018599-T1 in Siderastrea siderea

Genomic Location: contig_16:2100095...2111885
NR annotation: no NCBI-NR hit recorded
Species Siderastrea siderea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

FUN_018599-T1

ATGTCTTCTCCGAAAACTTCACCCGGAGAAGCTAGAAAGCAGAATGGTTCACGGAAAAGAAAGCGTCCTAGCGACCAGGATTCTGACATAAACGGAGCAGCAAAAAACAAAGCTTCTTGCGTGGCGCCGCGTGAGCCGGCTTGCTTCTACGAGCCAGATTTGACTATTTCTTCTTCAGACAATCCTGTAGATAGATATCTAGAACCCATTAGTTTAGAGGacgcaaaaaatggaaaagCAACAAGACCAATTCGTGTGTATGCGGACGGTGTATATGATGTGTACCATTTTGGTCATGCGAGGGCTTTAATGCAAGCTAAGCGAGCTTTCCCGACGGAAGTTTATCTGATGGTTGGAGTTTCCAATGATGAGCTAACACACAAGTACAAAGGGTTCACTGTTATGACAGAAGATGAACGGTATGAATCTCTTAGGCACTGCCGTTATGTTGATGAGGTCATACGTGATGCACCCTGGAGCATTACACCTGACTTCATTGAACTTCACAGGATTGACTTTGTTGCCCACGATGACTTGCCATACAAGAGTGCTGGTGCTGAAGACATTTACAAGGATGTTAAAGCTATGGGGAAGTTTGTGGCGACACAGAGAACAGAAGGAATTTCAACATCAGACCTTATAGCACGAGTGGTTAAAGATTATGATGTCTACATTAGGAGAAACTTGGCAAGAGGCTACACTGCTAAAGAGTTAAATGTCAGTTTTATCAAGGAAAAAGAAGTTCAAGTTAGACAAAAGATGGATCAAATCAAAGAAAGACTCACAGACAAGTCCCAGGAGATCCTCACAAAGTGGGAAGAAAAGTCGCGTGACTTTATCGGAAGCTTTATCGACATGTTTGGCAGGGATGGGCGATTGAACCAACTGTTTGGGAAAGGAAAAGACAGAATATTTGATGCAGGGGTGCGCATTAAGAGGGCACTGTCACCTGGACGAAATGTGGATCCTGATGCGTTTGACGTGTCCCCATACGGCTCTCCAACAAGATCCCCTAAAGTTCCCCGTCTTTCTTTTGACCCTGAGATAagcgacgacgatgatgatgcaGGTGACGATGCCGAAAAAGAAGCTGCAAGGGAGTCAGTTTACTGAAGGATTGTTGCCTAATGTTTCATTGGTCGTAATCATTGAGGGCTGGGTTTACTGAACAAGAGCTAATTGgttaaatgaaaaattttgtgATGCAGAtcgaaaatgaaaaataaattgcaaTAAAATTGCCATCAACATTGGCCAATATTGGCCAAAAGCATTGGTCACTATTGGCTAACACCATTAGCCAACATTGGCCAACAGTGACATTTGGCCAATGTTCAGTGTTCAACAGCAAATGGTTAGTGTTGATGAACGCCCGGTTGTTTgaagcaggattaagctaacccaggattagcatcAGTTTTGAATTCAATTTTACAGCCAAATGGTTAAGATTCCTGTACATTTATTTTTTGCCTTacgttttgactttggttgctttcaaactgcCACTTAgaatttgctgtgaaaactcttttgaataagagaaacgggaaccttggttaaatttaagccccaggttagcgttaaccagcttttgaacaactggatCCAGGAGAATTGGTCAATTGTATCAATTTGTCCTACGGGTATAATTCAGTCAGGCTTTTAACTAAAAGTGAGATTGTGATAACAGAGTAATGAACTGAAGTGGACCACAGTCTTGGCACAGTAGCTTGCAGTGGTGGCCATCAAGGTTGAGACACATTAGGCAACAGTTTGCAGGGACAGGTCTTTGCACTAAGCCACCTTATGCACTGTTCAGGAGACACATGGCTGACACGAATCCTTAAAATTATTATAAGGGTACCTGGGAACCAGAATAAATAATGCTTTCCTATTGGttgattttcattttgttatgGGAACAGGTCACATGAGCAGTGAAAGTGCGGTGACAATTTGTGCCACTTCGTCCCCTCATCCTAACACATGAATTCAAAACAGTTTGAATTTTTGTGGCCTAAATTGACGGGGACAAAATTCTGTCACTTCAACAAggatttttcattaaaacagCACGTCACACGAAGGGAATTATGGCTGCAACCTGTCCTTGCGACCTGTTACCTTATTTCACAACCttaaattctttttaaaatCTTGGATATGCAAAATAACTTTAGGTTGTTTGTAATTATGTGCACTTCACTGTATGAACCTTTATGTTAAGGTGGCTTATTGTACAAGTTTAATGTACAATGTCAGAACTTAAGATagaagtttattatatttaattatttattagaCAGCTAAAACATTTAAAAGTGAAGTCGTGAGAAAACGATAATTATGATTAACTCATTTACTTGTCAGTCTAATGTTGAGGGCTTAGAGGCTAATATTTCAATAAGCCCTTTTGGTAAAATGATTTACTGTGAGTGTTCAGGACATCAGAGCAAATATATAAAGGTTCGTCTGGAATTCTACCGTTTAAATTAGTGCTCAAAGATGCAGGTGAAAAGATTAGAAATATTATATCTTAAAAATGAATTTCTTTTCCCAATACCATCATCTCCATAATGCAGGGGCGTGGTGATGTAGTGGTTAgggcgttggacttcagatctgaaggtcggtggttcgacgtcCAGTCCCTGTCATCATGTTtattccttagacaagaaactttaccccacatcatctctctccacccaggtgtataaatggataccagcgacatactgctgggggtaaccctgcgatggactagcatcccattcaggggggaaTATCAATACCCTCAGTTGCTTCATTCaacagaaaccaggataagtTCCAGcggtgtgggcctccttggctcttGTGCGACTTGACCGTACCTTAATCATCTCCATAATATGCCTTATTTTTacagataacaagttccaattTTAAACCAAAAATGTCCTTATGAAATGTTGCTTTCTTGCTGCAGTGTCCTGATTCTCTATGAAAGAAGGATTTCTTAAATGAATATGATCCGGGGAACTGTGTTTTCCTTTGTACATGCACATCCATGTGTGGTTTTAGATGAATTGTGTAAAATGAAGTGTAAAATAAATATAGACAAATTCAATTTGTaacatttgaaataatttatttaattttgtggagAGGTTACAAAGATCTTGTAAAGTTAAATAGAACATGGTGCAAGAAAACATCTGTTTTCACAGTCCATAAATTACTCTGTAGCTTGAAAGTTTAGCAggaatttttgttttgcatactGTCAATTTTGGATCgttgttttgaaatttaaatGGAGAGGGATTGATTTTTTGGGATTTCATGAAGTAAAAAACTGTAACGGTCATGCATTATTCATACAGTATAGTGGATGTTTTGAAGCTTGCTTTCATTTAGTTTTGTAACAAaacttgcaggatattttttctGCAGAACATCAAGAAGTTTCATGCCATATGGAAAAAGTATAATTAAAAAACACAGTCGCTTAAGTTTTGCTTTCGACTTTACCACACAACATCAACAGAATTATAGGTGCACATCATACAAAACTAATATATGATGAATatcaatgtgtggttccagaaagtatccatacccccaccacagagggtcattggataTTCCAAGAgggagggggtcttaaaggccaaaatttttaaaggataGAATGTATGAGCCTAAATTGGaattttcagaggggtggggggtttAAACCAAATAAACCCTCTGTGGGGAGAGTGTGgatgttttctggaacaacaaTATTTATTTGGCAACACAATGTCACATGATTGAGTTTTCTCATCAGTATTCATCACTTGAAGAGTGTTAAACTTCATACAGccttaagtttaaaaaaatatatctaaCAAATATTTTAATTCGCTTACTTTTTGATGGAACAGATATGTGAGAAATAAAACACAGTTCCAAATTTGCTTTGTGTGGGTGAATTCCAAGTTATTACATAATATGATTATACCGATACCAAGGATAAGGTGTATGTGTCACAAATATGATCTCTGATCAAATGCATCAGATTTAATTTAATAAATTTAATCAGCCTCCTCCAACCACATGTTCGATTACTACAGTAACTACtactaataaaaataataatattcaaCCAGGATGCCCCAATCAAATACAGTGGTTTTTAGAAAGGTTCTAATAGTCATTTAACGCTATGGCACGCAAATACAGACAATACACAAGACTTTGATGGACAAAGTTGGGCATGAAAAAGCCAGCAAGGCTCGGATAGAAGCTACTGATCGGAAAACCACTGGATGAGTGGCCTTGGGATGTGGCGCCATACCGGGGATGCACCTCATGCCTGTACTTTAAGGCAGGTATAGTCGCACATCCGTGTGGCTGGAGTTACGTCCTTGGCCAAGTTAACCAAGTCCAGTGGAATACCAATGCCTCCTCCCTGACGGGGCTTCAGCACAAGGCTGAAGGGGTGCAACAAGCAGCGATTCCCTGACCTTAGTTTATTATTAATCAATTCCAAGTAAAGTGACAAAACAAGCAATATTACAGCCAATGAATAATGGAAGCCAAAAGGAGTCACGCAAAGACAAGGAGCCTGCAATAACCGTTAGGGTGGGAGGGATAAACTTTTCTGCTGGAGACTTGCAGCACTAAAAGAAAGTGCCGACTGAAAAGGTACAAGAGCATAATATAAGAATTATTATTTGCCAAATAAGGAGATAACGCGTATGAGAAAAAACTGCAGTGAACTGCACACTCACAAGTTACTGCTTGCCAACATTAACTTTTATTTTATGCTAAAATGTCAATATAATTTCACGAAAAATGATCAGACATAACTATCAAAATGAATGCCAGTtaatgtttgttgttgttgttttcaaaggaCACCATAAAATTCCCTATAGCTAAATGACTGAATCTTGTAAGAAATtgtcattaataataataactaataaTGATTATAATAATGCAACTTTAGGAGCACTTAAACAGAGCCAAAACACCACTTAAAATAATAActaaatcaaaaaaaaaagtctgACCACATTTCtggattttgtcaacagattaaaaagttacGGTGACAAATCGTCTCACCATACTTGCTCtggaagtgaaagggttaaaaatttgaaaagtaAACCAAAGTAGTGAAAGCTAATTTGGATTCTAATGCCAAATCACCACTCAGCAGTTTTTGATGTAGCCCTTCAATCAAGGTACGCTagtattgatttttattgatcatagtaccacctTCCAAGTCAATGGCATTAATTACACTTCATATGAATAAAGCCATTGACCCAGTATGTGGTATTGAATACTAGTTTTGTCAAATTGTATTAAATAtatcaaaatgaaacaaaaatattacaTTCTGATGATATTGCCACAATTCATTTACCAGAatatcagtgaaaaaaaataaaagtgctACTCTACATCCTACataattaaattttatttaGTTTCATATAATCCTCTAAAACCTTACGTCAGTTGATCCTCTACTATTTAAGTTGTCATTTTAATCTATATGATTACTATATTTTTACTTGTATTTGAACatattttctttattattttgtaaATTAACGCACAGCACAGCTTCTTTATGTCCAGTGGCCAAGTAACACAGGCAACATTTTCACGTAACATGAAACAACCTCAACTTCCAATGCAACATTTCTGCACGACAAATTACAGGAAAATGTTGCTCATATTACTTGGCCTTCACTGTACTGTCACTGTTTTAAATAACACATTGTCTAATAACTTGAATGCAACATACTACTGACAATAATTCAAAACATTTATGTCGATGCTGGGTCTTCTGGTACGCATTTATCTATTTACCCATGAGTTTTTTATACTACTACCTTGGGAGAAATTCTTCTTTGTCTCTGATAATTTCTACAATGGCCTAGTTCCATGTACACTTCCTGACTGAACATCTTGCTTGTGTACTACGTACTACACATCATTGTATTAACAGCTTTCAGTTACTCTTTTTTTCCCCCAAGATCCCTGTGGacaaatcctatacaggatcctacaggattttctaggatcctacaggatcctgtaagctcacacaggatcctacccaggatcctaaatggcaccatgtttTTTTAGGATCTTACTCAGGATCCTgcaaagtctttcaggatcctggttaagactgtctaggatcctgttaggatcctataggatcttgtttaggatcctgtagtaTCCTATAGGaacctacaggatcctaaacaagatcctgtacgatcctacaggatcttatataggatcttGTCAGGAacctggttaagatcctacaagatcctgttaggatcttattaggatcctgggcagaatttctaccagggatgCAAAATTAGAATCTGGATTTTACTTCCCAATCAAGTAGTTAGCACTACATCTCTAAACAGGTTCTGGCTGCCTTGCCAGAATCAGGAAGCCGGAAGCACCAGCACATCTATGTTGACTGTAAGCTGACTGGCCTCTCTTCTCTGCCATCATTAACACAAACTATTTAGGGAGGTACCTTAATCTACGTAAGTAAAGGAgtaacaagaattttaaaatacaGTGGAACTCTACCTGTCCAATGTATCATAAAAATGTGGTTCTGTCGACGGGCTAACCTGCAAGAGACCCATGTAAGAGAGAACAAGAGAGTGCTGCTAAAATTTGGCCTTGTCGCAAGTTATTAATTAGAGTGGTCAAAATAAGAGGTTTTCATATAAAATGTttgcaattagcttttttcggGTGAAAAGAAGTGTTTGTATTAAATCACAAGGTAGTTGTTTTAAAGGCGTGGCTGTATGGTGTGGTTCCACTGCATCTTAGAGTAATTATG

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01467 all species →	CTP_transf_like	Cytidylyltransferase-like	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR041723 all species →	Domain	CTP:phosphocholine cytidylyltransferase domain	Interproscan
IPR045049 all species →	Family	Choline-phosphate cytidylyltransferase Pcy1-like	Interproscan
IPR004821 all species →	Domain	Cytidyltransferase-like domain	Interproscan
IPR014729 all species →	Homologous_superfamily	Rossmann-like alpha/beta/alpha sandwich fold	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10739 all species →	CYTIDYLYLTRANSFERASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004105 all species →	Molecular Function	choline-phosphate cytidylyltransferase activity	Interproscan
GO:0006657 all species →	Biological Process	CDP-choline pathway	Interproscan
GO:0031210 all species →	Molecular Function	phosphatidylcholine binding	Interproscan
GO:0003824 all species →	Molecular Function	catalytic activity	Interproscan
GO:0009058 all species →	Biological Process	biosynthetic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00968	PCYT1; choline-phosphate cytidylyltransferase	EC:2.7.7.15	Choline metabolism in cancer	ko05231	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of FUN_018599-T1 across 85 RNA-seq samples of Siderastrea siderea. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

85Samples

78TPM > 0

7Conditions

644.9Max TPM

154.4Mean TPM

By condition

Condition	Samples	TPM > 0	Mean TPM	Max TPM
holobiont · low.pH_high.temp	20	17	131.53	406.59
holobiont · low.pH Control.temp	20	20	206.90	394.18
holobiont · control.pH_high.temp	20	18	163.28	644.87
holobiont · control.pH Control.temp	19	17	141.96	449.60
Whole organism	4	4	69.17	78.82
unannotated	1	1	38.35	38.35
live coral tissue/skeleton	1	1	75.85	75.85

Per sample · hover a bar for the full sample record · show / hide the sample table

SRA run	Condition	Tissue	Developmental stage	Treatment	Study	TPM
SRR22214414	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	406.59
SRR22214421	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	333.89
SRR22214415	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	254.69
SRR22214404	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	207.90
SRR22214423	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	204.35
SRR22214418	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	172.92
SRR22214406	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	152.62
SRR22214410	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	134.93
SRR22214419	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	133.84
SRR22214407	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	125.94
SRR22214413	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	114.07
SRR22214403	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	94.75
SRR22214412	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	67.96
SRR22214405	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	67.65
SRR22214417	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	66.44
SRR22214408	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	53.95
SRR22214402	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	38.02
SRR22214409	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	0.00
SRR22214416	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	0.00
SRR22214420	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	0.00
SRR22214440	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	394.18
SRR22214432	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	380.55
SRR22214431	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	326.82
SRR22214426	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	292.35
SRR22214434	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	256.69
SRR22214435	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	254.51
SRR22214427	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	242.06
SRR22214424	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	204.20
SRR22214425	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	203.52
SRR22214437	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	180.34
SRR22214445	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	178.46
SRR22214443	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	172.13
SRR22214442	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	170.67
SRR22214430	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	164.75
SRR22214428	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	159.21
SRR22214439	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	142.26
SRR22214441	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	122.10
SRR22214429	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	109.44
SRR22214436	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	98.71
SRR22214438	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	85.12
SRR22214452	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	644.87
SRR22214449	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	486.61
SRR22214454	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	265.76
SRR22214450	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	240.70
SRR22214457	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	235.86
SRR22214456	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	235.77
SRR22214465	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	222.09
SRR22214447	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	154.47
SRR22214446	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	153.03
SRR22214448	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	131.83
SRR22214467	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	100.80
SRR22214462	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	83.26
SRR22214453	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	79.51
SRR22214464	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	69.85
SRR22214458	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	51.89
SRR22214459	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	51.45
SRR22214460	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	31.97
SRR22214463	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	25.79
SRR22214451	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	0.00
SRR22214461	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	0.00
SRR22214546	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	449.60
SRR22214470	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	298.83
SRR22214455	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	297.29
SRR22214524	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	249.32
SRR22214535	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	209.43
SRR22214469	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	206.85
SRR22214433	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	180.82
SRR22214481	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	140.50
SRR22214492	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	120.65
SRR22214471	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	102.52
SRR22214444	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	98.01
SRR22214466	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	65.28
SRR22214548	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	64.85
SRR22214411	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	61.00
SRR22214468	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	60.79
SRR22214506	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	47.19
SRR22214400	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	44.35
SRR22214422	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	0.00
SRR22214547	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	0.00
SRR14295600	Whole organism	Whole organism	not recorded	not recorded	SRP315757	78.82
SRR14295603	Whole organism	Whole organism	not recorded	not recorded	SRP315757	71.82
SRR14295604	Whole organism	Whole organism	not recorded	not recorded	SRP315757	63.98
SRR14295601	Whole organism	Whole organism	not recorded	not recorded	SRP315757	62.04
ERR12861049	unannotated	not recorded	not recorded	not recorded	ERP159209	38.35
SRR12454619	live coral tissue/skeleton	live coral tissue/skeleton	not recorded	not recorded	SRP277390	75.85

Source: CnidoSite RNA-seq expression matrices (SSIDE_TPM, StringTie quantification over 85 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.