Gene detail

Detailed information of FUN_019160-T1 in Dendrogyra cylindrus

Genomic Location: contig_34:3594534...3599264
NR annotation: XP_020608683.1, steroid 17-alpha-hydroxylase/17,20 lyase-like [Orbicella faveolata]
Species Dendrogyra cylindrus · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

FUN_019160-T1

TAGCTACGTTTGTTTCGATCTGTTATGTAATCGCTGCCAATAATACTCTAAACATGACGTCTGTGTTTACAACGATTTACGATTCTCTAAGCTTTGAAAATGTTGTTTTGCTGTTGCTTCTGCTACTAATTTTGCATTACCTGATGGTGCTCTACGAGTTCAGGAAGATGCCGCCGGGTCCACGCTTAACGGCTATCCCTGTTTTGGGGAACCCATTTTCACTCGACTTCAAGGCGGAAAAACTTACTGACGCTTTCCAAAGTCTCAGGGAAACCTACGGCCGCGTTTTCTCCCTAAAACTTGGAAGCTACAAATTGGTGATGGCTTCAACATCCGAGGCCGTTAAGGAGATGCTGGTAACCAAGTCTGCTGATTTTGCCGGTAGACCGCAAACATATGCTAATGTGACAGCAAAACTTGGAGGTAAAGATATCGCGATGGGTAACTATGGTCCGGCCTGGAAGTTCCATCGCAAGCTGTTCACAACAGCCTTGCGCCAATATCTATCAGACATACCTCTCATAGAAAGCAGAGTGTCGACACATGCAGAAAAATTGATGCAGTTTATGGAAAAACAAGATGGGAAACCATTTGACCCAGCTGATTGTTTACAGCGTGCCGTTGCTGATGTCATTTGCGGCATTACCTTTGGAAAAGGTTTCGACACGACTAACCCTGATATGAACAAACTTTTGAAAGCCAACGCAGACCTTATGGCTGATACAGGCAATGCTCAATTGGTGACCATCTTAGATTTCTTTCCATTGGCAAAGTACCTACCCATTAAGGCTTATGATCGATGTTTTCAACATTTCTTTAAAATGTTCGACATCATTCGTATATTCTTAAGAGAGCGAGAAGAAAATTTCGACCCAGACAAACCCGTACAGGATTTGATCTCAGGTCTTCTTCACGCTAAACATGAAGCCAAATGCGAGGGTGATAAGGAGAGATTTGCTCTTCTTTCCGAGGACTACCTAGTCAACACGATCGAAGACATGTTCCTTGGTGGCTCCGAAACCACAAGTACCACATTGAAATGGGCAATAGCGTTTTTGGTCAACTTCCCAATGTACCAAGAGGATATTCAACGAGAGCTAGATGAAGTAGTTGGTGAACGGAATCCTGGTTTGGAAGACCGAGCCAATCTGCCCATCGTTCACGCAACCATAATGGAAACGCTACGAGTTGGAAACGTCGCGCCTCTTGGAATTCCACACTCCACTCTTGCTGATACGACACTCTGCGGATACCGTGTTCCCAAAGATACCATTGTGTTTGCTGATACGGAGTCTGTTCATTTGGATCCCAAGTGCTGGGAAAACCCCACAGTGTTTAACCCGTACCGGCATATTGACGAGGATGGAAAGTTGGTCACCAATCAAGGCAATTTCTACCCTTTTGGAGCTGGACGCCGCGTCTGCGCTGGCGAGCCTTTGGCTAAAGCTGAACTGTTCTTGTTTCTCTCGCGGATGTTTCAGAAGTTCACTTTCACCGCAGAAGAAGATGGTCGTCCACcaagcacaaagggaatgttcAGTATCACCCAGTTTCCTGTTCCTTACAAGATACGTGCAATAAAACGGAAGTGATCGTATATTTGCACAATAGCACCACTTTAAATTGTCGAAAATTGAAGTAGGCTCTGAACCCTTTACTTTGTAAAGTTGTATTTGAGCATGCTGATTTCTGTCAATTGATCAATTTATTTATGTACTTTAACACCGAGGAGCTACTTTGACGTACTTTACATTCGTTGAAACGTTTTATATATAGAACAGTGAGCACCAAGCTTGTATTTGAATTATGACTTAACACTAAAATTGAGGGTGTTTTTTATATGCTATACTTATGCTATGGTAACATGTTTAGTCAAGAATATGACCCTAACTTGTTCACTAAAGATGAAGCTTTGTAGCATCGACATCCAACGAGATTGCAATCAcaatattatttacaaataaTGCGTTTTCAGCATTTTGTGGGTGGTTCGATAAATGGTACTTTTATGATTGTTCGG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q92113	Steroid 17-alpha-hydroxylase/17,20 lyase OS=Squalus acanthias OX=7797 GN=CYP17A1 PE=2 SV=1
O73853	Steroid 17-alpha-hydroxylase/17,20 lyase OS=Ictalurus punctatus OX=7998 GN=cyp17a1 PE=2 SV=1
P30437	Steroid 17-alpha-hydroxylase/17,20 lyase OS=Oncorhynchus mykiss OX=8022 GN=cyp17a1 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000639 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00067 all species →	p450	Cytochrome P450	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002401 all species →	Family	Cytochrome P450, E-class, group I	Interproscan
IPR001128 all species →	Family	Cytochrome P450	Interproscan
IPR036396 all species →	Homologous_superfamily	Cytochrome P450 superfamily	Interproscan
IPR050182 all species →	Family	Cytochrome P450 family 2	Interproscan
IPR017972 all species →	Conserved_site	Cytochrome P450, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24300 all species →	CYTOCHROME P450 508A4-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004497 all species →	Molecular Function	monooxygenase activity	Interproscan
GO:0005506 all species →	Molecular Function	iron ion binding	Interproscan
GO:0016705 all species →	Molecular Function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	Interproscan
GO:0020037 all species →	Molecular Function	heme binding	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0006082 all species →	Biological Process	organic acid metabolic process	Interproscan
GO:0006805 all species →	Biological Process	xenobiotic metabolic process	Interproscan
GO:0016712 all species →	Molecular Function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen	Interproscan
GO:0043231 all species →	Cellular Component	intracellular membrane-bounded organelle	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for FUN_019160-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.