Detailed information of FUN_019348-T1 in Acropora pulchra

Genomic Location: ptg000015l:1389788...1398416
NR annotation: XP_015766190.1, PREDICTED: hemicentin-1-like [Acropora digitifera]
Species Acropora pulchra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5RDA4Galectin-3-binding protein OS=Pongo abelii OX=9601 GN=LGALS3BP PE=1 SV=1
Q08380Galectin-3-binding protein OS=Homo sapiens OX=9606 GN=LGALS3BP PE=1 SV=1
Q2VLH6Scavenger receptor cysteine-rich type 1 protein M130 OS=Mus musculus OX=10090 GN=Cd163 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000305 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00530
all species →		SRCRScavenger receptor cysteine-rich domainDomainInterproscan
PF07686
all species →		V-setImmunoglobulin V-set domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001190
all species →		DomainSRCR domainInterproscan
IPR036772
all species →		Homologous_superfamilySRCR-like domain superfamilyInterproscan
IPR003599
all species →		DomainImmunoglobulin subtypeInterproscan
IPR013106
all species →		DomainImmunoglobulin V-set domainInterproscan
IPR013783
all species →		Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR017448
all species →		DomainSRCR-like domainInterproscan
IPR036179
all species →		Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR007110
all species →		DomainImmunoglobulin-like domainInterproscan
IPR050686
all species →		FamilySRCR-S1 Scavenger ReceptorInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR48071
all species →		SRCR DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016020
all species →		Cellular ComponentmembraneInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_019348-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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