Detailed information of FUN_019578-T1 in Acropora pulchra

Genomic Location: ptg000015l:3698714...3709354
NR annotation: XP_044172201.1, hemicentin-1-like [Acropora millepora]
Species Acropora pulchra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q95218Scavenger receptor cysteine-rich domain-containing protein DMBT1 OS=Oryctolagus cuniculus OX=9986 GN=Dmbt1 PE=1 SV=2
Q2VLH6Scavenger receptor cysteine-rich type 1 protein M130 OS=Mus musculus OX=10090 GN=Cd163 PE=1 SV=2
F7J220Scavenger receptor cysteine-rich domain superfamily protein OS=Patiria pectinifera OX=7594 GN=SRCR1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000321 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00530
all species →		SRCRScavenger receptor cysteine-rich domainDomainInterproscan
PF07686
all species →		V-setImmunoglobulin V-set domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036772
all species →		Homologous_superfamilySRCR-like domain superfamilyInterproscan
IPR007110
all species →		DomainImmunoglobulin-like domainInterproscan
IPR050686
all species →		FamilySRCR-S1 Scavenger ReceptorInterproscan
IPR001190
all species →		DomainSRCR domainInterproscan
IPR003598
all species →		DomainImmunoglobulin subtype 2Interproscan
IPR003599
all species →		DomainImmunoglobulin subtypeInterproscan
IPR013783
all species →		Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR017448
all species →		DomainSRCR-like domainInterproscan
IPR036179
all species →		Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR013106
all species →		DomainImmunoglobulin V-set domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR48071
all species →		SRCR DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016020
all species →		Cellular ComponentmembraneInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K00280LOXL2_3_4; lysyl oxidase-like protein 2/3/4EC:1.4.3.-
Enzymes with EC numbers-deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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