Gene detail

Detailed information of FUN_019655-T2 in Dendrogyra cylindrus

Genomic Location: contig_36:1888367...1894107
NR annotation: XP_020618320.1, adipocyte plasma membrane-associated protein-like isoform X2 [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

FUN_019655-T2

CTTCCCTTTGTCACATAATGCCCAATGCCATTTATAGTGTCACGCAATCGTCAGTAATCTTTCAGCAGGCGGTGTAGAATTTCATAATTCTAGAATTGCCTTTCCACTTTGGCGCCACGTTTCACCGGAGTTTGCTGTGAGCTGTTCGACGCTTGCTAAACAGGAATCGCCGAAAAGATGTAAGATTTTAACAAATCTTCCTCCATGAAGAGATTTGCATGACTTGCACACAGGCCggcaaaccatttactatgaaCTTTTAAACTAGTTAGTTTACATTCTGGCGCCAGTACGGTTCCTGCGTCGGATTCTGTATTTTGTATCATCGTCTGATAGGGGTCCTTTAGGAATGTTGGTGACCTTGGTGTTACTGATTTTAAGTGCTCTAGACATTTTGCTCTTTTTTCTGCCATCTCCAATTGATCCTAAGCCAATCAGTGGTCTTGAAAAGAAGAGCCCTAAGTTTGAAGGAGTGTTGGAGATTAATAGCATTTTAACACAGACTGAGAGATTATTTGAAGGACAGCTGCTTGGTCCTGAATCTATAGCGGCAGATAGTGCAGGTACTCTATACACTGGCTTGGCAGATGGCAGAATTGTCAAACTCGAGGGAGACAAAGTGATAGATGTTGTTCGTACTGGCAAACCACCATGTGGAACTGAAGAGCTTGAGCCCACATGTGGTCGGCCATTAGGTATGCGCTTTGACAGATATGGGATCAACTTGATAGTGGCTGATGCATATTTTGGCCTGCTTGAAGTGAACCCCAAGGCCAGAACAGTGAGCACACTAGTGCCTGCTTCACCAGGAATTAACGGCAAACCCTTTCGATTTGTTAACGATCTGGACATTGCACGTGATGGAACCATCTACTTCACAGATTCAAGTGCTAAATGGCAAAGACGCCATTTCCGGTATGGGCTTCTTGAAGGAGATGACACTGGAAGACTAATGGCATACCACCCCAAGACAGGAGATATGGAAGTACTCATGGACGGTCTTCATTTTGCTAATGGTGTCCAGATTTCACCAGAGGGAGATCACGTGCTTGTACTGGAAACAACTGCAGCAAGGATAACAAAGTATTACATCAAAGGGCAGCACGAAGGGAAATCTGAAGTCTTTGCCCAAAATCTGCCTGGACTCCCTGACAACATCCGCCTAAGCAGTAAAGGTGGCTATTGGGTTGGTATAGCATTAGTACGATCAGACTTCAGTGACCTGCTGGCACAGTACCCTAGGGCTAGGAACTTTATAGCTAAGGTGTTTTCTATTCCATGGCTAACAAACGCCCTAGGCACAAGACATGGCATTCTACTGGAGTTGAATGAGAATGGTCAAATCACCAGAAGCCTCCATGATCCAACTGCCAGCGTTGTACCTGGCATCAGTGAGGTGCATGATGATGGTGACGTGCTGTACTTTGGATGCTACAAAAATCCATTCTTGGGCAAGCTTGTTTTAAAGGACTGATTCAGTTAATATGAAGGTCATGGAGCTAAGGTCTCCACTCAAAGTTAAAGGCTAAGATTTCTTGACGATTTCGAGGCTTTGTAGGCAGGGGCTTTGAAGAATAAACTAATCAAATGAAAAAACTTATGGAAATAACATCTGTGGATTATTTTCTAAAGTTAGTTTTGATTTTATTCTTGTGACTGTGCCagttattttttaattgaatggaaacttttaaggtgattccactgaattgcattgcgcatccttgctgcgcacgattttttgcgtcatttagcgcgtgcacgagcgctcgcgcacacaatattaaggcatttccttcagattaagcttagcgcagggaaattaatggttattttcttctaaacgagcacggtgaaccccattttttaaggcattaacttaaatgacatacggttggctacaatatatcgcgatttaaagaaaagttgattattctattttgagatatttttatttgaatgctttaaaaagcacgtattttggtagtgctgcttacgtgcgcacgcggcaaaatctctaatttcttttataatcttaattccagttcaattaaaatagtttgttatgtaagattaaagtctattttgtataactgcttcgatattttaatgcaagaaatgattttttctagaaatgaaagttcccttttcggattactagggttcctaatataaacctcatgggtcatatatttaccataatagccatccaggttgcacaaaaacgagcacggtgacccccattttttattgcatttttgcaatgctcataacataattatgaactggaccaagtcttagaaaattttgattactccttctctttcagtggaatcaccttaaggaaGTAAGATAGCTTTTTGTTCTACTCTGAGGTGTTTTTTTAAAACCGTATTTTGTTTCACATTTTCAGATTGAAAAATTAAAGTAACAATCAAAATAACAGAGTTCATGCAATTTAAATTCTAAAGGTGCTTTTTGCCAACGTTACGTGTAATAACCACTTTAGCTAGAATTTTAGATTGAAATTGATTGCCTCTGTAGAAGAAAGATTAAATTTGCTTAATAaataa

Protein

Uniprot

Uniprot term	Description
Q5ZIF1	Adipocyte plasma membrane-associated protein OS=Gallus gallus OX=9031 GN=APMAP PE=2 SV=1
Q3T0E5	Adipocyte plasma membrane-associated protein OS=Bos taurus OX=9913 GN=APMAP PE=2 SV=1
Q9HDC9	Adipocyte plasma membrane-associated protein OS=Homo sapiens OX=9606 GN=APMAP PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03088	Str_synth	Strictosidine synthase	Repeat	Interproscan
PF20067	SSL_N	Strictosidine synthase-like, N-terminal	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR018119	Domain	Strictosidine synthase, conserved region	Interproscan
IPR011042	Homologous_superfamily	Six-bladed beta-propeller, TolB-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10426	STRICTOSIDINE SYNTHASE-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0009058	Biological Process	biosynthetic process	Interproscan
GO:0016844	Molecular Function	strictosidine synthase activity	Interproscan
GO:0012505	Cellular Component	endomembrane system	Interproscan
GO:0016787	Molecular Function	hydrolase activity	Interproscan