Gene detail

Detailed information of FUN_019678-T1 in Siderastrea siderea

Genomic Location: contig_17:6364605...6384408
NR annotation: no NCBI-NR hit recorded
Species abbreviation SSIDE · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

FUN_019678-T1

ATGGCGGCAGATTTGTTTTTGGTGACAGTTTACGTTTTACTAGGTTCGTTTCCAATCTTGACAGTGGGGCAAAGTAACAGAACAGTATTTTCACCATCCTCAACCTCAGGTTGTACCTGCGATTTGACTGGTAATGGGTGTGATTTGAACTGCTGTTGTGATACTGATTGTAGCAGCTTAGACCAAGAAGCGTTTACCCAATGCAGAGATACAGACATAAACCGTGACGACCGTGTTTGTATCTCCAGTTCAATTCTCTTTACATTCAGAGAAGACACAAAATTCAGAACTCAGACCACTGGTTCTGGTCTCTTCTGCATTATCAGAGATAACTATGAATCCCGTAATTTCTACAATGATGTCCAGACAGCCAGCACAAGTGAGGAATTTTCCAACCTTAAGAGTCAGTCAGCATCAGTTGTTTTTGACTACAACAGGGGAAAAACAGAGCAGACTTCCGCAGCATTATCATACAAGGTAGGCGATCCAGTGTTGCTTGCTTTTGATAATGGTGCAAGAGGTTTCCTATCTTTACCAAGGCCACTGTTTGGAAGTGAATGTGATGATAACAATGCTGCAGggtaTCGTGAGGACAGTAGCACAGAATGTACAAGAACTATCCCCTTACTTGCCTCTGCATGTGATGCACTTGCTGTGCTTAGTGCCAGTAGTTACTATACAGGCTTCAAGGTGGCAAAGAATCCTACAGTTCTAAACAGTAATACCTCTAACTCAGCCAACAATTCCAATTCTTCTGTCATTACTCCTGATCTTCTATCTGTGGAGCTTGGAAAGCCATTGTTGTGCAAAACAAACCTTGGTATACCTCGCACATGTTCATTTGACGTACCACCAAATCCCACTTATGATGCGCTGAACAAGACATGTAATAATGTTGTTTTCGAGGTATCATACACAATACAGTATTCCAATAGCTCAACTGACATTGTATCAGTGATGGTGGAGTTTCTACTGGGGAGTGTCACAGCAGATGAAGGGTTGGATCTGAGGCAAAAAGTGTCAGTTAGCTTCTCAAAGGCTGGGAGTACAGACACTACATTCAGGAGATCAGGCAACCCTGGTTATATTGTTGGTGAACCTCTTGTTGCTGGAAAGCTTGTCACAGTCAACAATAAAGATGCAATTTTTCTCAGCAGTGATCGTAACACATGGCTGACCATCATCAGCCCACCAGCGGGTGGAGCATGCAATAACTCTACTGTTCGGACCTCCGTAACATTTGGCATTGACATGCGCACTGGCTGCACTATCAGTGTGCCACTGGCCTTGAAGGGATCCCAGTGCAAGCTGATTCAAGACACAGTGTTAAACACATTGTTAGGAGATCAGCCTGATTATGTGGCCTCCTTTGGTAACTCAGATGTAAACAGTGTGGGAGACTGGGTCAAGATTATCAACAACAGACCTGCAAATGAGGCTGGGCAAGGGGATGGTGAGTGTCGCAATATGATACTGGGGCTTCATATTGAAGTTCTTTTTGCCAATTTTGGTTTCTTGGCCAAACCTCAACCAAGGatTGTTGGGGTTATGTTTAAATATGACGATCCTAAAGATATACAGTATCAGTGCACGGGAATCCGATGTCAACCGGGTAGCTCCAGTCTTGAGCAGCAAGTTGAAGTCGTTACATCAGTGGGCTTTGTTGATGTATCTGACAAACCCGTGGCGCAGATCAAGCCTCGGCCAACATTTGAAGCCAAAGCAGCATCAGATTTCTTCTTCCCTTTTCTTTGACAAAGAGGTGTAGTTAGAGGAGTGATTGTCGTTTTGGTGCATCCTCTTCAAAGTCTTTATATAAGAGATTCTGATTCACGCAGAATTGTCACGTCGGCCTATCGCCAGAAAAACGCGTCACTGGCTGTTGCTATAGAAACAACGTCCTTGCAACATCCACAGGCTGGCCAAGGGGCTCCATTCTGTGAGACAGGGTTCAGAACAAATTTATTACCATGTTCTCGCTGACTCGTTGACTGTGTGATTATAACCGACCTTTGTTAGTCGCACGAGTTCTCCATCGTGTTTAACTATAGTCGAAACCTTGCTGGTTTATTCTATAAAACTGACGATTCACTTTGGCCCAGTTTTCATGACTGACATTTTTTAATGCGCAGACTATGAACTGAGGCGATTGTTGAGaagtaaacaaacaagggggttagtatctaaagaaactgtggtgttgcGCCGGTGGGGAcctgaaacacaaaattttggatttatcaactgagatgataaggtaaattggcc

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07773 all species →	TCTN_DUF1619	Tectonic domain DUF1619	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR040354 all species →	Family	Tectonic	Interproscan
IPR011677 all species →	Domain	Tectonic domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14611 all species →	TECTONIC FAMILY MEMBER	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0060271 all species →	Biological Process	cilium assembly	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K19382	TCTN1_3; tectonic-1/3	-	Cilium and associated proteins	ko03037	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.