Gene detail

Detailed information of FUN_019729-T1 in Colpophyllia natans

Genomic Location: contig_34:2945633...2954826
NR annotation: XP_020617543.1, uncharacterized protein LOC110055495 [Orbicella faveolata]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
P13611	Versican core protein OS=Homo sapiens OX=9606 GN=VCAN PE=1 SV=3
Q28858	Versican core protein (Fragments) OS=Macaca nemestrina OX=9545 GN=VCAN PE=2 SV=1
Q9ERB4	Versican core protein (Fragments) OS=Rattus norvegicus OX=10116 GN=Vcan PE=2 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00008	EGF	EGF-like domain	Domain	Interproscan
PF00193	Xlink	Extracellular link domain	Domain	Interproscan
PF00024	PAN_1	PAN domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000538	Domain	Link domain	Interproscan
IPR043210	Family	CD44 antigen-like	Interproscan
IPR000742	Domain	EGF-like domain	Interproscan
IPR016186	Homologous_superfamily	C-type lectin-like/link domain superfamily	Interproscan
IPR003609	Domain	PAN/Apple domain	Interproscan
IPR016187	Homologous_superfamily	C-type lectin fold	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10225	HYALURONAN RECEPTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005540	Molecular Function	hyaluronic acid binding	Interproscan
GO:0007155	Biological Process	cell adhesion	Interproscan
GO:0004888	Molecular Function	transmembrane signaling receptor activity	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan