Detailed information of FUN_020019-T1 in Dendrogyra cylindrus

Genomic Location: contig_37:1510702...1513826
NR annotation: XP_020605841.1, tRNA wybutosine-synthesizing protein 2 homolog [Orbicella faveolata]
Species Dendrogyra cylindrus · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q4V8B8tRNA wybutosine-synthesizing protein 2 homolog OS=Rattus norvegicus OX=10116 GN=Trmt12 PE=2 SV=2
Q58D65tRNA wybutosine-synthesizing protein 2 homolog OS=Bos taurus OX=9913 GN=TRMT12 PE=2 SV=1
Q8BG71tRNA wybutosine-synthesizing protein 2 homolog OS=Mus musculus OX=10090 GN=Trmt12 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007857 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02475
all species →		Met_10Met-10+ like-proteinFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR029063
all species →		Homologous_superfamilyS-adenosyl-L-methionine-dependent methyltransferase superfamilyInterproscan
IPR030382
all species →		DomainSAM-dependent methyltransferase TRM5/TYW2-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23245
all species →		TRNA METHYLTRANSFERASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0008175
all species →		Molecular FunctiontRNA methyltransferase activityInterproscan
GO:0030488
all species →		Biological ProcesstRNA methylationInterproscan
GO:0031591
all species →		Biological Processwybutosine biosynthetic processInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K07055TRM12, TYW2; tRNA wybutosine-synthesizing protein 2EC:2.5.1.114
Transfer RNA biogenesisko03016deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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