Gene detail

Detailed information of FUN_020277-T1 in Dendrogyra cylindrus

Genomic Location: contig_38:576549...580263
NR annotation: KAJ7391032.1, Glucose-fructose oxidoreductase domain-containing protein 2 [Desmophyllum pertusum]
Species Dendrogyra cylindrus · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

FUN_020277-T1

AGTCTAGGCCGAGCGTGAAACAAGATGGCGCTTCATGGTTGACATTGAGTGAAATCCTTCCTCGTCGATAACATTTTATAAATGTACAAAATGCTACCTTCTGTTGGTGTAGTTGACACGGGGAATTCTTCTCGAATACTTTTACCACTTCTTCGTTCGGCTGGGTTCACGGTGAGCGGAATATGGGGTGCTTCAAACCAGCAAGCGAAGGAAATGGCGGAAGAGTACAAAGTTCCCTTCCACACATCCAAAATAGACGAGTTACTCCTGCGAGAAGATGTGGATTTGGTGTGCGTGCTTTGTCCACCTCACGTTCGGGCCGAGGTAGCGGTGAAAGCCCTTTCTATCGGAAAACACGTGCTGTGTGATTCTCCTGCTGGTCTGAGCAGAGAAGAGGCAGTAAGAATGGTGAACGCTGCACAGTATTATCCTAAGCTTCTTTCTCTAATCAGACACGAGCTTAGGTTTCTGCCAGCCTTTATTAAGATGAAGCAATATTTAGAGGAGGATTTTTGCGGGGAGCCTTTAATCTGCGAGTGTAAGATTGAAATGGGCTCCTTGCTTAGTAACCGCTACAACTGGATGTGCGACCAGGCTATGGGGGGCGGTGTTCTTACCAATGTTGGGGCACACGTCATCGATATTATCTCgttcttaaccaatcagagggCAATTGAAGTTCATGGAACTCTAAAAACCTTTGTGACCCAAACAGATAATGTGTCCAGCTTTCGACACATCTCTAGTGATGACTACACTGCTTTTCAGATCAAACTGAATGGTGGCGCTTTTGCAACTGTTTCTCTCAACACCCATATACCAGGGCGCTATTCTCAAACTGTTACCATATATGGCACTAAAGGGCAGCTGATCGCAAGGAATGGCAATTtgtatggaatgaagaatggaGGCAAAGAAGAACTTATTTATGGTGACATTGCTCGCATCCCAGGCTTGTTTAATGTGGAGAAACTTCCACCCAGCATCTTCTTGACTGGTCTTGAAGGATGGGTATCTGAGATAAAGAGGGCATTTGAAGAGTCCATTGATAAAGATGATCGGAGGATTGCAGACTTGCAAACAATTTCCAGTGCAGCTTCATTTCAGGACGGACTATATACCCGCACTGTCCTTGATGCTATCATTGAGTCCAGTAGAACTGGCACATGGCGTCAAGTTGAGTTCATTGCTCCTGATGAAACAAGTGAAGCAACAGTGGGCTCTGAGGAAAAAACAGTGCAAATCATCGCCGAGCAACAGACAGAAAAACCAGATGAAAAAGAATATCCATCTCCTGTTATAAGAAGGATGCTGACCCAGTAAATGGGATACCACAAGAATTACTGTACTTGAGAATCTTGAagcttatatattttttttttacagtcaactctctcctAACAGACACCTACTGCCTTTTTCAGGTCCCAGCCCTTTTTCAgccattttactgtaactaaactgcCAATAAGACAGACACCTTTCTAAGATGATAATTGGTACAGCCAGTCCCAACGGTGTCCATTCTAGAGAGAGTTGACTACATATGTTTGACAATTATTTGCCAATGGCTCAGTAAATCCTGGTAAATCCTGAGATTCACTTGTCTTTCAACAAATAATGTTGTTTAAGTATCATTTTAACAGATGGATATTAGGAACTTCAAAATaatgagagagaaaaaaaaacacagaattAGCAAACATAAATGTTGGCTTGCATACACGTAAACCAAATTAATACATTGCTTGTGAATCAATTCACACACAAGCCAATAAAGTGGaacaaaagaaacactacaACAAGACAatcatctggtacctttgttttaCCATTGGTAACTTATGACCTTGAAATGAgtagctctggtctgaagagtaTTAAATTTCGGTCACTCAATCTGTTACAGTTTGGCATGGCCACATGATCTACAGCATGGCCACATGATCTACGAAACCACTGTGTTTACAGTCTCTTAATGCCCTGACCACCATTTCTTAAACATGGTTTTGTTCCAAAGGCCATGGTAATCATTTGAATggaaatttcattcagcaattgTATGCCGTTTTTACTTGCGTGGATGACAAAGGGGTGTGGCTTAGTAACCTAGCCTAGAAATGCCATATTCACCACCTAGCGCAGTGAATATAGTGTCATAAGCCGAGCTTCTTGACAAAGTCTATTTGAGACATGTAGGTATGCTTGTAAAAGAATAGCTTGAGTTTTAAATAACATTACAGAATGTTTACATACAAAAGTAAAATGCAAATTTGACATTGTCAAAGTTAAGAGTAGCCAAGTTCTTTTTATAGTTAAAACTTTCATGTTTAAAGCCTTAAGCCCGGgtcaaacgaggatgagagttgactctcatgagagttttcgtcaactTTCATCGACTATTGTCAACTCGGGCCAAATGAGAACAAGAGTTGTCGAGAGTCCATCAAGAGTGACTACAAATGAGAGAAAACTCTCATAGActctcatgaaaaatttgagcacATTCAAAGTCAATGAGAGcgcatgagagtttcaggccaaacaagagcgagagtttgaactctcattAACTCTCATCATCGTTTGGCCTGGGCTTTACAGGTAAATGCAGCAAGGATTGCTATTCTGGCTTAAGTTATGGGAATTTAATCAGTGGTAGCCATGCTTTCTGTAGACAATGTATTAATTCATTGTAGTTATTGGATGACACTGTTTAGGTACCGCAAACAAGTTATTCTTCTGTGTGTTAAACTAAATAATTCCTCTATTTTTCAAGCTGCCATCTTTGATCATGGTAAGCAAAATCTCAGAAGAAGAGTACCAAGAAGAATGGCGAGAGGCACAAAAAGAAAATGCACTTCTCCCCATTCTCTTCATGGGTGGGATACCTCTCTCCTTTACCCATTTGAAGCCCTCGCATGATAAAAAGTATGCTGTGATCACATTGGCTAAGGACTATCCACATGCCTTGCTCTCCAACCCTGAGTATTATTACCCCACCCC

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9NXC2	Glucose-fructose oxidoreductase domain-containing protein 1 OS=Homo sapiens OX=9606 GN=GFOD1 PE=1 SV=1
Q3UHD2	Glucose-fructose oxidoreductase domain-containing protein 1 OS=Mus musculus OX=10090 GN=Gfod1 PE=1 SV=1
Q9CYH5	Glucose-fructose oxidoreductase domain-containing protein 2 OS=Mus musculus OX=10090 GN=Gfod2 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0008273 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01408 all species →	GFO_IDH_MocA	Oxidoreductase family, NAD-binding Rossmann fold	Family	Interproscan
PF02894 all species →	GFO_IDH_MocA_C	Oxidoreductase family, C-terminal alpha/beta domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000683 all species →	Domain	Gfo/Idh/MocA-like oxidoreductase, N-terminal	Interproscan
IPR050463 all species →	Family	Gfo/Idh/MocA family oxidoreductases and glycosidases	Interproscan
IPR036291 all species →	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan
IPR004104 all species →	Domain	Gfo/Idh/MocA-like oxidoreductase, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43818 all species →	BCDNA.GH03377	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000166 all species →	Molecular Function	nucleotide binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for FUN_020277-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.