Gene detail

Detailed information of FUN_020404-T1 in Colpophyllia natans

Genomic Location: contig_36:2309748...2324686
NR annotation: XP_020621145.1, uncharacterized protein LOC110058826 [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

FUN_020404-T1

ATGGAAATATTCTTGAACATTCTGGCTGGGATAATGATTATGGCTTTTCGCCTCGAACCCGAATGCGAGTGTGTCTGGAGCAGTAGTGATTTCTCCACTCAACACCAGAGTTACAACTTTGCTCAAGTGTCGGGGGAATCCTCTACAGGGCCCAAATACAGAGGATACTGGAAATTCGATGGTTCTGATCCAGATTTAAGaatgaaagaaaaagaagataaGGGAGTGCTGAAAGCAGCCATAAAGGGACGTACGAAAACTGAACCCTTATTAGGTTTTCAGACTGCAGAGGATCTTGGTCTTGTTAAGGTTGCAAACAAGGTCCAAAATGAGGAAACAATCACTGACCTGCTCCGCGGTATCAGAAAGATGAAAGTAGTGAAGtgcgaaaaagaaactgaaacagGAGCCAGGGAAGATCTGCGTTTGCAACCCGACAACCTCAGCGTAACCAGTGAGATGACAATTGGTTGTCCACGTGACGAGCCTGATGGTCCACCGACATCCTTAGGAGCGACGGAAACGGAGCGACATCAACAACAGCCAGACAATACTGCAGTATGCGGGCCAAGAAGATCATCGAAAACAGGAACGTCAGCTTGGAACACGATCAGTTACAGTGGTTTTTTCAACTTCAAAGAGGGGCGGTGTCCTGGCAGCAAGGCAATGGTTGGTTTTTCAAGTGTTATGGTACCCAACGTTAACATTGGGGACTGCGAATACACAATTGCGatttggataagattttctcgAGATAATGGTTATTATTTGTCTCAAATATATGGCTCTCCAAAAAGTTGGAGATTGCTTGTTTTGGAAATTATGAACAGTTTTGCAGCCATCTGTAGCGAAAAACTTAACATAACATGTTTGTCGACTTCTCTTGGTGCTCCTATGAATAACTGGACTCATATTGCAGTCACCTGTGAACAAGATGACGACATCAAAATGTTCATCAATGGTGAACCGGCTAACGTTTCGGAAAGTCGGCCAATGATTATTTTCAGTGACACAAGTATGGTTCCTAAAGAGACGTTCGTTTTGGACCACTACCTTTCAAGACCATTAATAATGGATCTTCACATCTTTGGATTCGCTTTGCCTCGAGAcgagatttttaatttatatagAGGTCTCATATTAATCACAAACCAAACAAAGGAAGTGAAGGGACGCACACTTACCATCCGGTGGGGGCAAGAATCGTGTTCTGTTGACAGATACGCTGTTCATTATAGAGAATGGAAGCCAGGAAATAATGCAAGCACATGGAAAGTAGTTAATGTGTCGCGATTTGAAGACTACTATAACCTTGAATTGGAATGCTTCAAGGAATATGAAGTAGCAGTTACTGGATGGGGAGCCAGAACACTTAAACCTTGGAAAGTCAAAACTGGACAAGATTTTCCGCAGATCGTAAATTTGAAAGTAATGGAAGGTAATGTAAACATCACGTGGGTGCTTCCATTCCAAGGAGAGTGTCACGTGTTTGAGTACCTAATCTACTACAGAAAAGTGATTTCTGAAGTTAATACAAGCAAATGGAATGTGGTTAGCTTGTCCCAATATAACGCAACCAACCACAATCTTCAACTCCAATGCTACACGGAATATGAAATAACAGTTACTGCACAGAGTGCAAACGGAGAAACACCTCTAAACCAAAGCAAGCTATGGAAAACCAAAACCGGAAGAGGTAAACTTTCACCCCCTGTGGGTGACAACAAGACAATGGAAATAAACAGTTGCGTTCTGAATTACATGTGGAGTCCTCCAATTCGCATTGGATGTCCTCTTACGATATATATAATATACTACAGAGAAATTCAATCACACGACAACAAAACTGATTGGCTGCAAATCCCTATCACCCAGCTTAAACAAACTTCCTATGTCATACCACTGAAATGCGACTGGGAATATCTGATTGCAATTTCTGTTAAAGATGAAGAAAAGGAGAGTGTCATGTCAAACTTCTGGCGCGTAAAAACCAAGTGTCAGTCTGCGAAAGATACGAAAGATATACcttccaaaatgtttttatcGGGTGGACAAACTGTTGGTGTAATTGTCGGAGGTCTTGCTCTTCTTGCCATGATACTTGTGGGGATTAGCTGTCACAGGAAGAGAACACGAAAGAGAAAACTAAATGCCCTTCTTGCGAAACGGTTAAAGTCCGACATGATTCTCTTACTGCCACGGGAAGTTCCACCCGAGCGGATAACATTCATGGAGGAACTGGGTCGAGGGGCTTTCGGTAAGGTACAAAGAGGAGCCCTGAAGGAATTACCAACAGTAGAAATATTTGACAAGCCCAGGGACCAAAGACTGGAAATCAAAGAAGCAAAGGTGGTTGCTATCAAAACTTTACTTGCAACAGCCACCGAGGGAGGTAAGGAACttttcctgcaggaaattgaATTCATGAAGCAAATTGGTTCTCACCGGAATGTCCTCAGCATGCTCGGTTACTGGGTGAAGTCAGAACCCATCATGTTGATCTTGGAATATGTTCCACATGGCGATCTTCTTCAGTGGCttagaggcaaaaggcaacagatgaaatttaaaaatagtATCGATGGGGAAATTTTTAAAGATTTGACGTAA

Transcript

FUN_020404-T1

Protein

Uniprot

Uniprot term	Description
P36888	Receptor-type tyrosine-protein kinase FLT3 OS=Homo sapiens OX=9606 GN=FLT3 PE=1 SV=2
P21802	Fibroblast growth factor receptor 2 OS=Homo sapiens OX=9606 GN=FGFR2 PE=1 SV=1
P21803	Fibroblast growth factor receptor 2 OS=Mus musculus OX=10090 GN=Fgfr2 PE=1 SV=4

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07714	PK_Tyr_Ser-Thr	Protein tyrosine and serine/threonine kinase	Domain	Interproscan
PF13385	Laminin_G_3	Concanavalin A-like lectin/glucanases superfamily	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003961	Domain	Fibronectin type III	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR000719	Domain	Protein kinase domain	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR001245	Domain	Serine-threonine/tyrosine-protein kinase, catalytic domain	Interproscan
IPR036116	Homologous_superfamily	Fibronectin type III superfamily	Interproscan
IPR020635	Domain	Tyrosine-protein kinase, catalytic domain	Interproscan
IPR013320	Homologous_superfamily	Concanavalin A-like lectin/glucanase domain superfamily	Interproscan
IPR050122	Family	Receptor Tyrosine Kinase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24416	TYROSINE-PROTEIN KINASE RECEPTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan
GO:0004713	Molecular Function	protein tyrosine kinase activity	Interproscan
GO:0004714	Molecular Function	transmembrane receptor protein tyrosine kinase activity	Interproscan
GO:0005887	Cellular Component	plasma membrane	Interproscan
GO:0007169	Biological Process	cell surface receptor protein tyrosine kinase signaling pathway	Interproscan
GO:0007275	Biological Process	multicellular organism development	Interproscan
GO:0033674	Biological Process	positive regulation of kinase activity	Interproscan
GO:0043235	Cellular Component	receptor complex	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K23413	ANOS1, KAL1, WFDC19; anosmin-1	-	Peptidases and inhibitors	ko01002	deepkoala