Detailed information of FUN_020532-T1 in Colpophyllia natans

Genomic Location: contig_36:3839115...3867079
NR annotation: XP_020625899.1, semaphorin-2A-like isoform X1 [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q17330Semaphorin-1A OS=Caenorhabditis elegans OX=6239 GN=smp-1 PE=2 SV=2
Q26473Semaphorin-1A OS=Schistocerca americana OX=7009 GN=SEMA-1A PE=1 SV=1
Q24322Semaphorin-1A OS=Drosophila melanogaster OX=7227 GN=Sema1a PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07679I-setImmunoglobulin I-set domainDomainInterproscan
PF01390SEASEA domainFamilyInterproscan
PF01437PSIPlexin repeatFamilyInterproscan
PF01403SemaSema domainRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001627DomainSema domainInterproscan
IPR013098DomainImmunoglobulin I-setInterproscan
IPR000082DomainSEA domainInterproscan
IPR003598DomainImmunoglobulin subtype 2Interproscan
IPR016201DomainPSI domainInterproscan
IPR036179Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR036364Homologous_superfamilySEA domain superfamilyInterproscan
IPR036352Homologous_superfamilySema domain superfamilyInterproscan
IPR002165RepeatPlexin repeatInterproscan
IPR027231FamilySemaphorinInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR007110DomainImmunoglobulin-like domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11036SEMAPHORINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0001755Biological Processneural crest cell migrationInterproscan
GO:0007411Biological Processaxon guidanceInterproscan
GO:0030215Molecular Functionsemaphorin receptor bindingInterproscan
GO:0030335Biological Processpositive regulation of cell migrationInterproscan
GO:0045499Molecular Functionchemorepellent activityInterproscan
GO:0048843Biological Processnegative regulation of axon extension involved in axon guidanceInterproscan
GO:0050919Biological Processnegative chemotaxisInterproscan
GO:0071526Biological Processsemaphorin-plexin signaling pathwayInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K06521SEMA4, CD100; semaphorin 4-CD moleculesko04090deepkoala

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