Gene detail

Detailed information of FUN_020582-T1 in Colpophyllia natans

Genomic Location: contig_37:225551...229913
NR annotation: XP_020626329.1, protein DDI1 homolog 2-like [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

FUN_020582-T1

ATTTCCGCTCAGCTTTGTCAGAATTACAAAGCATTTACTATTTATTGAGGTAATAGCTGTTGCTTTATAGCATTTATTCAGGGATGAAGGTCACAGCTACTTTAGAGGGAGATCAGATATTCACACTCGACGTCAGTGAGGATTTAGAGCTCGAAAACTTCAAAGCTCTGCTGGAATTCGAGTGCGGAGTTCAGTCGTCCCAAATAGTGATTTTTCACAACGGCGTTCCACTTGGCGATAACAAGAGGACGTTGAATGGTTATGGGATTAAAGATGGCGATGTACTCCTGATACAGCGTGCTTTACGGCCCACACCAACTCCTGCTCAGTTACGAGGCACTACTCCAACTGGGGGTTTAAACTGGGGTAATGTACAAATACCTGGCAGCTCATCCCGCCCCCAATCAGCCCGCAATCAAGCAGGCTCAGGACAGGCAAGGCAGACACCTGTGGATCCAGACAGTCCTGAATACATTAGAGACATGTTCCTAGCAGATCCCCACCAACTTTCTCTACTTAAAGAGAGAAATCCAGAGCTTGCTGCTGCACTGTTGAGTGGGAATTTATCAGAGTTTGCATCAATGCTTCAAAGACAACGTCAAGAGAGGGCTGATAGAGATATGCAGAGGATTCGCACCATCAACGCTGATCCCTTTGACCTAGAGGCTCAAAAACAAATTGCTGAAGAGATTCGAATGTCAAATGTAAATCAGAACATGGAGATAGCCATGGAGTACTCTCCAGAATCCTTTGGCAAGGTAGTCATGCTTTATATCAACTGTAAACTGGACGGACACCCTGTCAAAGCTTTCGTTGATTCAGGAGCCCAAATGACCTTCATGAGTGTAGCATGTGCCGAGAGGTGTCACATTATGCGGCTTCTGGATCAGCGGTGGGCAGGAATCGCAAAGGGTGTGGGAACACAGAAAATTGTTGGACGCGTTCATGTGGCTCAGATCCAGATAGAGAATGACTTTTTGCCATCGTCCTTCTCTGTTATGGAGGACCAGCCGATGGATCTTGTTTTGGGGTTAGATATGCTTAAAAGGCACCAGtGCTGTATCGACCTCAAAAACAATGTGCTTAGGATTGGTACTACTGGAACCGAAACACCCTTCCTAGCTGAGTCTGAACTGCCAGTGACTGATCGTCTGGCATTTAATGAAGAAGGTGGACAAATGGAGATTGAGGACAAACAGCTAGCTGAAATGGAAGACAAGGAGCTTGCAGAAGCAATGGACAGATCAGCAAAGGAGGCAGCTCATGGAgcatcttcttcatcttcttctcaATCCCTTCCAACACAGTCTTCATCGGCATCAGGTGTTTCCAGTTCCTCGTCTGGGACGGGTGTGGCCAGTTTTCCAGAAGTAAGCATTCAGAGGATAGTTGAGATGGGATTCACAAGGGAGGAAGTTATTTTAGAATTACAGAGGAAAAATGGAAATGTCGATGTTGCTGCCGCTGCTCTGTTAGCTAGGTCACTCAAATTACCATCATCAGTGAAGAGATGACAACTTTTGAATGAGACCATTGTAGTCATGATTTTGTGCCCAGTTTCTCAATTAAAAATCCCTAGGTCTTAAAGTAGGTCTTAATGCCATGTTACTGATATTTATCAAATTGTGGTTGCATATTTTAacaagaaatgtatttttttaaataggaaaatattatttgaagTTGTTATGCATGTAAAGTCATGAAACCATTGGAAGAGACCTGGTGTAGAGGAAATAAAAAAGGGTACAGTTTGTCCTAAGCTTAAGACATCTACAGCATAGAATGTTTTTGTACAAAGTATGTATACAAATGTGTGTACTTACAATCACAGATGGATTTGCTTGGAGCACATGCGTTCTTATGGAAAGGGACTATTACTAATTATATTTAACACACTTATGGAAAGGGACTATTACTAATTATATTTAACACACTTGGAATTCAGTTTTCTTAGCCACattgtaaaataattaaagtTACTGTTATCAG

Protein

Uniprot

Gene family

Uniprot term	Description
Q497D6	Protein DDI1 homolog 2 OS=Xenopus tropicalis OX=8364 GN=ddi2 PE=2 SV=1
Q7ZYA7	Protein DDI1 homolog 2 OS=Xenopus laevis OX=8355 GN=ddi2 PE=2 SV=1
Q6TH22	Protein DDI1 homolog 2 OS=Danio rerio OX=7955 GN=ddi2 PE=2 SV=1

Gene family	Subfamily
Ubiquitin Family	UBD\|Alpha-Helix\|UBA
Ubiquitin Family	ULD\|UFD/UBQ\|UBQ_PIM

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00627	UBA	UBA/TS-N domain	Domain	Interproscan
PF00240	ubiquitin	Ubiquitin family	Domain	Interproscan
PF09668	Asp_protease	Aspartyl protease	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR015940	Domain	Ubiquitin-associated domain	Interproscan
IPR000626	Domain	Ubiquitin-like domain	Interproscan
IPR029071	Homologous_superfamily	Ubiquitin-like domain superfamily	Interproscan
IPR021109	Homologous_superfamily	Aspartic peptidase domain superfamily	Interproscan
IPR009060	Homologous_superfamily	UBA-like superfamily	Interproscan
IPR019103	Domain	Aspartic peptidase, DDI1-type	Interproscan
IPR033882	Domain	DNA damage inducible protein 1 ubiquitin-like domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15397	SODIUM-GLUCOSE COTRANSPORTER REGULATORY PROTEIN -RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0004190	Molecular Function	aspartic-type endopeptidase activity	Interproscan
GO:0006508	Biological Process	proteolysis	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K11885	DDI1; DNA damage-inducible protein 1	-	Proteasome	ko03051	deepkoala