Detailed information of FUN_021012-T3 in Dendrogyra cylindrus

Genomic Location: contig_39:3250801...3270450
NR annotation: XP_020611470.1, integrin alpha-V-like [Orbicella faveolata]
Species Dendrogyra cylindrus · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P26008Integrin alpha-V OS=Gallus gallus OX=9031 GN=ITGAV PE=2 SV=1
P80746Integrin alpha-V OS=Bos taurus OX=9913 GN=ITGAV PE=1 SV=3
P06756Integrin alpha-V OS=Homo sapiens OX=9606 GN=ITGAV PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000604 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF20806
all species →		Integrin_A_Ig_3Integrin alpha Ig-like domain 3DomainInterproscan
PF08441
all species →		Integrin_A_Ig_1Integrin alpha Ig-like domain 1DomainInterproscan
PF20805
all species →		Integrin_A_Ig_2Integrin alpha Ig-like domain 2DomainInterproscan
PF01839
all species →		FG-GAPFG-GAP repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR028994
all species →		Homologous_superfamilyIntegrin alpha, N-terminalInterproscan
IPR048286
all species →		DomainIntegrin alpha, third immunoglobulin-like domainInterproscan
IPR013649
all species →		DomainIntegrin alpha, first immunoglubulin-like domainInterproscan
IPR013519
all species →		RepeatIntegrin alpha beta-propellorInterproscan
IPR048285
all species →		DomainIntegrin alpha, second immunoglobulin-like domainInterproscan
IPR032695
all species →		Homologous_superfamilyIntegrin domain superfamilyInterproscan
IPR000413
all species →		FamilyIntegrin alpha chainInterproscan
IPR013517
all species →		RepeatFG-GAP repeatInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23220
all species →		INTEGRIN ALPHAInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005178
all species →		Molecular Functionintegrin bindingInterproscan
GO:0007160
all species →		Biological Processcell-matrix adhesionInterproscan
GO:0007229
all species →		Biological Processintegrin-mediated signaling pathwayInterproscan
GO:0008305
all species →		Cellular Componentintegrin complexInterproscan
GO:0009897
all species →		Cellular Componentexternal side of plasma membraneInterproscan
GO:0033627
all species →		Biological Processcell adhesion mediated by integrinInterproscan
GO:0098609
all species →		Biological Processcell-cell adhesionInterproscan
GO:0007155
all species →		Biological Processcell adhesionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_021012-T3.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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