Gene detail

Detailed information of FUN_021071-T3 in Dendrogyra cylindrus

Genomic Location: contig_39:3760339...3777821
NR annotation: KAJ7391836.1, hypothetical protein OS493_016126 [Desmophyllum pertusum]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

FUN_021071-T3

ggcgctttatccgcagcgacgctatcatcttttgtatttcgcttagccgaaggtgttactcctttcaagttaacgacagattaatgacaggttaattaaacgggggcggaatggcggctacaatactttgtcaacaggctctccccctctcccgaccttttcttgccgctttcttttcgccccatcctcgaccggagagcctgttcacaggctatggTTTACGTAGCGCGTATTCGGAACAGTGTACGCGAACGTGAAGAATCAACTCGCTGTTCCAATTCAAGATATACGCTGTCTCTTTTGTGTTTCTGTTCACTTAGCTTTGGGTTTTGTTCTCTCTTTCAGTGCCTTTCACCGTCAGATCTCTACAGCTTCGCTGCATCTTCTTCGTCAAATCTGCTGAATTCCACGGAATTCGTGCAAGCGAGTCCATTGATTGTTTACTGCCTGTTGCCAGCGCCAGAAAAGAACGCAGGTCGATGTAAAGTTTCTCCCAAGCACCACAGCGAACTGTTCAGCTcgttcgcaaggaatttcagtCAACATTGCGAACAGGGAAACATCACACTTGAAGCGCTGGGCCACATCCTGGAAGAGGTCAACAAAACTATCGGGCAATTTTTAACACGAAAGAAGTGTTTTTCTGCTGAAAGCATATTTGAGGAAAttaaagaacaagaagaagatgAACATCATGAGGAAGAAGGAGAGCACCATGAAGAGGAGGAAAAGGTTCTTCATCAAGAAGAATTTGAAAAGGCTTGCGCTAGCATTGTTTTACATCTGGTAAAAGGATTCTGTATTGAGAAGGCACATGGGTACGAGGAAACAGAATCGCATCTACCATCAAAAGAATCCTTCATCAATGACCTCTTCAAGCAAAAGAAACATCTATCTGAAGAGGACTTGGAGGAGATTATGAAAATTCTTAACATTGGCAAGGAAGAAGACAGTGATAGCCACAATGATCACAGTGAACACAGTGATCATGATCATAGGCGCAGAAGGTCAGCTGCATCAGTCTTGTTGCCACAGAGAGGATCAGGTGCACCCCATGGTGTTCATCGCCGTGCAGTTGTTCATCATGATCATTCTAAAGCTAATGGTGAAAGTGGCAGTTGTTACTCACTGGATGCCTTGTTGACAATTTTTGGCATTGATCATGCAGTTGGTGCAGATATGTTTGACTTCAAGGAACTTTGTCCTGCATTTATTCAACAAGCCAGAAGTGGAGCTTGcagcaaaacaaaagaaacaaaaaaacctGCCTCAGAAAAGAACATGGGAAAAAACATTGCTTCAAGGAGTTCCTCCCTTTTGGCCATGTTCATTTCCTTGTATCTTTTCTCCTGAAAATCAATAGAAGGAAGACATGCATTAACATAATACTTTGAAGATAACCACCAAGTACAAAGTAACCACCAAGTACAATGCCAAGCTGTGAACATTGCAAGCAATCAATGAATAGAAAAACACAATAGCAACATAATTAAGCTTTAATTAGACTTGGTGCTATGGCAATTATAATACAGAAGGTGTAAGAAGGTGTGAGAAATAGCTAAAAAACATCATAGACATAAGCAAGCTTTGAAGAAGAAATACAAGGATAATCATTATTCCTGACAGTAACCCAATCTCTCACACCAAACTGGTTTGTTTTGATAATTGTAAATGAAATGTTACCCCTTAGCTTAATCATGTGCTTGAGCCCCAGGCAGCTATAATTTTATTCGCTTTACTGTAACTTACATTATGGCATCACATTGATAAATAACACAAGAAACCGATCGATATGCCCAAACAGCTGGAAACTCATTTCATTGTGTCTGCGCCCTGGCTACTTTTAGTATAACCTATTATTAAGGTGATTCAGAAGCACTGAactgcattgcgcatccttactgcgtaTGATTTtccgcgtcatttagcgcgcgcacgagcaCGCGCACGCgaacacacaacattacggcatttccttcaggttaagctcggcagggaaataaatggtcattatCTTCTAGACGAGCACGGTGAGCCCCATTTTTAATAGACCTGAGCTGTCCATGTATAATTCAATCATTACCAGACAATTAGCTAGAAGTTCTCATTTTAAGCAAAATCATGTTTAAATGCAATCGTTCAGTGCATCGTATAAGGAATTACGACATTGCTGGTAGAAACGACACCTCTCATCCATTATTGCAATGGTAACTGAAT

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF21116	EF-hand_Zip	Zip protein EF-hand	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR049406	Domain	Zinc transporter ZIP4/12, EF-hand	Interproscan
IPR050799	Family	Zinc Iron Protein (ZIP) Transporter	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12191	SOLUTE CARRIER FAMILY 39	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005385	Molecular Function	zinc ion transmembrane transporter activity	Interproscan
GO:0005887	Cellular Component	plasma membrane	Interproscan
GO:0006875	Biological Process	obsolete intracellular metal ion homeostasis	Interproscan
GO:0071578	Biological Process	zinc ion import across plasma membrane	Interproscan
GO:0140410	Molecular Function	monoatomic cation:bicarbonate symporter activity	Interproscan