Detailed information of FUN_021403-T1 in Dendrogyra cylindrus

Genomic Location: contig_41:61873...72492
NR annotation: PFX29645.1, Stromelysin-1 [Stylophora pistillata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P08254Stromelysin-1 OS=Homo sapiens OX=9606 GN=MMP3 PE=1 SV=2
P28863Stromelysin-1 OS=Oryctolagus cuniculus OX=9986 GN=MMP3 PE=2 SV=1
Q9XSZ5Interstitial collagenase OS=Equus caballus OX=9796 GN=MMP1 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF000017tm_17 transmembrane receptor (rhodopsin family)FamilyInterproscan
PF00413Peptidase_M10MatrixinDomainInterproscan
PF01549ShKShK domain-likeDomainInterproscan
PF01471PG_binding_1Putative peptidoglycan binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006026DomainPeptidase, metallopeptidaseInterproscan
IPR003582DomainShKT domainInterproscan
IPR036365Homologous_superfamilyPGBD-like superfamilyInterproscan
IPR021190FamilyPeptidase M10AInterproscan
IPR000276FamilyG protein-coupled receptor, rhodopsin-likeInterproscan
IPR001818DomainPeptidase M10, metallopeptidaseInterproscan
IPR024079Homologous_superfamilyMetallopeptidase, catalytic domain superfamilyInterproscan
IPR017452DomainGPCR, rhodopsin-like, 7TMInterproscan
IPR033739DomainPeptidase M10A, catalytic domainInterproscan
IPR002477DomainPeptidoglycan binding-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10201MATRIX METALLOPROTEINASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006508Biological ProcessproteolysisInterproscan
GO:0008237Molecular Functionmetallopeptidase activityInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0004222Molecular Functionmetalloendopeptidase activityInterproscan
GO:0030198Biological Processextracellular matrix organizationInterproscan
GO:0030574Biological Processcollagen catabolic processInterproscan
GO:0004930Molecular FunctionG protein-coupled receptor activityInterproscan
GO:0007186Biological ProcessG protein-coupled receptor signaling pathwayInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0031012Cellular Componentextracellular matrixInterproscan

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