Detailed information of FUN_021625-T1 in Colpophyllia natans

Genomic Location: contig_39:3490098...3495189
NR annotation: TPP56741.1, Tubulin beta chain [Fasciola gigantica]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P30883Tubulin beta-4 chain OS=Xenopus laevis OX=8355 GN=tubb4 PE=1 SV=1
P36221Tubulin beta-1 chain OS=Notothenia neglecta OX=202063 GN=tubb1 PE=1 SV=1
Q24560Tubulin beta-1 chain OS=Drosophila melanogaster OX=7227 GN=betaTub56D PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00091TubulinTubulin/FtsZ family, GTPase domainDomainInterproscan
PF03953Tubulin_CTubulin C-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003008DomainTubulin/FtsZ, GTPase domainInterproscan
IPR036525Homologous_superfamilyTubulin/FtsZ, GTPase domain superfamilyInterproscan
IPR000217FamilyTubulinInterproscan
IPR013838Binding_siteBeta tubulin, autoregulation binding siteInterproscan
IPR008280Homologous_superfamilyTubulin/FtsZ, C-terminalInterproscan
IPR017975Conserved_siteTubulin, conserved siteInterproscan
IPR018316DomainTubulin/FtsZ, 2-layer sandwich domainInterproscan
IPR002453FamilyBeta tubulinInterproscan
IPR037103Homologous_superfamilyTubulin/FtsZ-like, C-terminal domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11588TUBULINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005525Molecular FunctionGTP bindingInterproscan
GO:0000226Biological Processmicrotubule cytoskeleton organizationInterproscan
GO:0000278Biological Processmitotic cell cycleInterproscan
GO:0005200Molecular Functionstructural constituent of cytoskeletonInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005874Cellular ComponentmicrotubuleInterproscan
GO:0007017Biological Processmicrotubule-based processInterproscan
GO:0003924Molecular FunctionGTPase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K07375TUBB; tubulin beta-Exosomeko04147deepkoala

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