Gene detail

Detailed information of FUN_021769-T1 in Siderastrea siderea

Genomic Location: contig_19:10708353...10710017
NR annotation: no NCBI-NR hit recorded
Species abbreviation SSIDE · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00118 all species →	Cpn60_TCP1	TCP-1/cpn60 chaperonin family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027413 all species →	Homologous_superfamily	GroEL-like equatorial domain superfamily	Interproscan
IPR027410 all species →	Homologous_superfamily	TCP-1-like chaperonin intermediate domain superfamily	Interproscan
IPR017998 all species →	Family	Chaperone tailless complex polypeptide 1 (TCP-1)	Interproscan
IPR027409 all species →	Homologous_superfamily	GroEL-like apical domain superfamily	Interproscan
IPR042619 all species →	Family	Bardet-Biedl syndrome 10 protein	Interproscan
IPR002423 all species →	Family	Chaperonin Cpn60/GroEL/TCP-1 family	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14667 all species →	BARDET-BIEDL SYNDROME 10 PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0140662 all species →	Molecular Function	ATP-dependent protein folding chaperone	Interproscan
GO:0051131 all species →	Biological Process	chaperone-mediated protein complex assembly	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K19401	BBS10; Bardet-Biedl syndrome 10 protein	-	Cilium and associated proteins	ko03037	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.