Detailed information of FUN_021918-T1 in Colpophyllia natans

Genomic Location: contig_40:3730936...3761426
NR annotation: XP_020612508.1, rap guanine nucleotide exchange factor 6-like isoform X3 [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8TEU7Rap guanine nucleotide exchange factor 6 OS=Homo sapiens OX=9606 GN=RAPGEF6 PE=1 SV=2
F1M386Rap guanine nucleotide exchange factor 2 OS=Rattus norvegicus OX=10116 GN=Rapgef2 PE=1 SV=2
F1PBJ0Rap guanine nucleotide exchange factor 2 OS=Canis lupus familiaris OX=9615 GN=RAPGEF2 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00595PDZPDZ domainDomainInterproscan
PF00617RasGEFRasGEF domainFamilyInterproscan
PF00788RARas association (RalGDS/AF-6) domainDomainInterproscan
PF00618RasGEF_NRasGEF N-terminal motifDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001895DomainRas guanine-nucleotide exchange factors catalytic domainInterproscan
IPR000595DomainCyclic nucleotide-binding domainInterproscan
IPR014710Homologous_superfamilyRmlC-like jelly roll foldInterproscan
IPR000651DomainRas-like guanine nucleotide exchange factor, N-terminalInterproscan
IPR036964Homologous_superfamilyRas guanine-nucleotide exchange factor, catalytic domain superfamilyInterproscan
IPR023578Homologous_superfamilyRas guanine nucleotide exchange factor domain superfamilyInterproscan
IPR001478DomainPDZ domainInterproscan
IPR008937FamilyRas-like guanine nucleotide exchange factorInterproscan
IPR000159DomainRas-associating domainInterproscan
IPR036034Homologous_superfamilyPDZ superfamilyInterproscan
IPR018490Homologous_superfamilyCyclic nucleotide-binding domain superfamilyInterproscan
IPR029071Homologous_superfamilyUbiquitin-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23113GUANINE NUCLEOTIDE EXCHANGE FACTORInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005085Molecular Functionguanyl-nucleotide exchange factor activityInterproscan
GO:0007264Biological Processsmall GTPase-mediated signal transductionInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0007265Biological ProcessRas protein signal transductionInterproscan
GO:0016324Cellular Componentapical plasma membraneInterproscan
GO:0043547Biological Processpositive regulation of GTPase activityInterproscan
GO:0007165Biological Processsignal transductionInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K08018RAPGEF2, PDZGEF1; Rap guanine nucleotide exchange factor 2-Tight junctionko04530deepkoala

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