Gene detail

Detailed information of FUN_021924-T2 in Dendrogyra cylindrus

Genomic Location: contig_42:3105442...3112778
NR annotation: KAJ7355019.1, hypothetical protein OS493_028686 [Desmophyllum pertusum]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

FUN_021924-T2

AAGGACTTAGTCACATCGTGTAGGGTGTGTTCACGCATGTTGCTCACATacgtgtaatgttcttcttCATTAATAAGATTTGTTTCGCTATACGCATAAATAAGAAAAGACATTTACGGATTCACGGAATTGAAAGAGTTTGAAAGTAAGGTTTAAAATGGGTTGCGTGTCTTCGAAACAAAAGGCTCAGGACAGCCATCCGACTTGTACGAATTCATTGTTACCGATGAACTAACCGTGGTACAAGGATGCGGGCTTGGTGGAGGCTCTCTCATCAATGCGAATGTGGGATTGGATGTGGAGCCTGAGGTTTTTCAGGACCCATTGTGGCCGAAAGAAATAAGAGAAGACTTGGATCAGCTGACGAGAATTGATCGACAACGCTTTATAGATATGATAAAACCTTCGCCGTATCCAGATAATTATCCACCACTGCACAAGATGGAACGGATGAAAGATAGCCTTAGCGAATTTGACATCGAGGACCTAGACAAGGTGTTTTATAAGACGCCACTTTACGTGACGTTCCAGGACACACCATCCAATCATGCTGGAGTTCCTCAGCCCAAATGCACAGGCTGTGGAAATTGTTTGGGTGGCTGTAATGTTGGTGCTAAGAACACGTTAAACATGAATTATTTGCCCGACGCTAAAGCGCATGGAGCGGAGATGTTCGCTGAGGTAGAAGTAACAGTGGTATTGAGGTCTCAGAATTCCAATGGTTGGATTGTCAAGTACAAACGACTTGTTCCTGGAAGCGTTGACCTTGAGGAACAGACAGTTCGTGCCAGCTACGTCATTCTCGGTGCCGGCGCGATAGGTTCCACAAAAATACTCCTCCGTTCAAAGGAACGCGGTCTTGATGTATCAGGCGAAATTGGAAAACGATTCTCGACGAACGGAGACGCAGTAGGATTTAGCTATAACGGCGACCAAATTGCTAACTCTGTCGGGGTTGAAACCAAAGACATGTCATCTGCCCAACCACCTGGTCCCACAGTCACATCCATAATTGACTTTCGTAAGGTGAACGGAGGCAATTTCGAAGACAACTTTATCATCGAGGACGGGACGGCTCCGTCGATTCTAGCTGTACCGTTTACGGTTGGTGTCAGTTTTGGCGCAAAGGTTATTGGGATTGATAAGTACCCTGCGAATGAGCTCCTTGAGAAAACATTTCAGGAAATACAAGGCAAAGGAATCGACAATACTCTTACCCTGCTGTCTATGGGTCACGACAGTGCGTCTGGAGTAATTTCCTTTGAGAACAGCATCGACGCCATTGATATCAGCTGGGACAGAGTGGGCTATGAGAAAAATTTCGAAAACATAAATCAAGCATTAGAAAAACTAACTCGTGGCCTTGGAGGAACGTTTGTGAAGAACCCAATGTGGTCTCAGTCATTAGGACGGAGTGTCATAACTGTCCACCCACTGGGAGGTTGCCCCATGGGAGACTCTGGGCGAACGGCTGTGGTGAACCATGCAGGACAAGTATTTGACGGTGAGACGGATAAGCTACTTGAAGGACTGTATGTCGTAGACGGATCCATTATTCCTCGATCCGTTGGAGTCAATCCCTCGCTCACTATTGGCTGTCTTGCAGAGCGTTGTATGCGATACTTAGCAGAAAAAGAAGGGTGGAATATTGACTACGACACATTCATCTCTCTAGGCCATGAGACATTTGTTAATCATTAACATTGCTGTTACTATCGCAGTTATAATTGGTACTTTTTAAGGGAGGCGCTAAATCGAAATTTCCATGCAAGTAATTTTGTTGAATCATGCACAGTCAATGTATCATGTTGACTTTATCTTCCCTAACTATACTTTTAGTATGCACGGAACAATTCCTATTGGTCAATCTAAGCCcggagtagtattatcggagtctgactaaaaccacctcgggcgcaccttaatttctcacctcttcaggagactagtagtcagggacctaaaatcaaacctcgctcacaagctcgctcggtttgattttaagtccctgactatagtctcctaaagaggtaagaaattaaggagctgctcggtagttttagtcagactccgataatactactcgcgtTAAAAGACGCGAAACTGGCTATACACCacaccccgcccgggaagggccgcgccgcggaca

Protein

Uniprot

Uniprot term	Description
P22637	Cholesterol oxidase OS=Brevibacterium sterolicum OX=1702 GN=choB PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00732	GMC_oxred_N	GMC oxidoreductase	Domain	Interproscan
PF05199	GMC_oxred_C	GMC oxidoreductase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000172	Domain	Glucose-methanol-choline oxidoreductase, N-terminal	Interproscan
IPR007867	Domain	Glucose-methanol-choline oxidoreductase, C-terminal	Interproscan
IPR036188	Homologous_superfamily	FAD/NAD(P)-binding domain superfamily	Interproscan
IPR052542	Family	Cholesterol Oxidase Enzyme	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47470	CHOLESTEROL OXIDASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016614	Molecular Function	oxidoreductase activity, acting on CH-OH group of donors	Interproscan
GO:0050660	Molecular Function	flavin adenine dinucleotide binding	Interproscan