Detailed information of FUN_022081-T1 in Acropora pulchra

Genomic Location: ptg000016l:5303189...5305068
NR annotation: XP_015761380.1, PREDICTED: phosphatidylcholine translocator ABCB4-like [Acropora digitifera]
Species Acropora pulchra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9SYI2ABC transporter B family member 3 OS=Arabidopsis thaliana OX=3702 GN=ABCB3 PE=3 SV=1
Q9SYI3ABC transporter B family member 5 OS=Arabidopsis thaliana OX=3702 GN=ABCB5 PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000779 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00664
all species →
ABC_membraneABC transporter transmembrane regionFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR039421
all species →
FamilyType 1 protein exporterInterproscan
IPR036640
all species →
Homologous_superfamilyABC transporter type 1, transmembrane domain superfamilyInterproscan
IPR011527
all species →
DomainABC transporter type 1, transmembrane domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24222
all species →
ABC TRANSPORTER B FAMILYInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005887
all species →
Cellular Componentplasma membraneInterproscan
GO:0042626
all species →
Molecular FunctionATPase-coupled transmembrane transporter activityInterproscan
GO:0005524
all species →
Molecular FunctionATP bindingInterproscan
GO:0016020
all species →
Cellular ComponentmembraneInterproscan
GO:0055085
all species →
Biological Processtransmembrane transportInterproscan
GO:0140359
all species →
Molecular FunctionABC-type transporter activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_022081-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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